Subsets of GSE230865 - PolyA RNA-seq from Medulloblastoma cells ± EYA2 knockdown

Description:
Analysis of steady-state mRNA levels in two medulloblastoma-derived cell lines. At time of import, last updated (by provider) on: Apr 29 2024 Contributors: ; [Melanie Vincent, Matthew D Galbraith, Arthur Wolin, Heide L Ford]
Accession: GSE230865 
Publication: Wolin, Arthur R et al. (2023)  
Dimension: 44427 (18 samples)
Quantitation types:
Subsets:
Name cell line genotype
25
58
Assays:
Group 3 MB D458 cells, EYA2 shRNA#7 rep 1
Group 3 MB D425 cells, EYA2 shRNA#8, rep 1
Group 3 MB D458 cells, EYA2 shRNA#7 rep 2
Group 3 MB D425 cells, EYA2 shRNA#8, rep 3
Group 3 MB D458 cells, EYA2 shRNA#7 rep 3
Group 3 MB D458 cells, EYA2 shRNA#8, rep 3
Group 3 MB D458 cells, EYA2 shRNA#8, rep 2
Group 3 MB D425 cells, EYA2 shRNA#6, rep 2
Group 3 MB D425 cells, EYA2 shRNA#6, rep 1
Group 3 MB D458 cells, EYA2 shRNA#8, rep1
Group 3 MB D458 cells, non-targeting control, rep 3
Group 3 MB D425 cells, non-targeting control, rep 2
Group 3 MB D425 cells, non-targeting control, rep 3
Group 3 MB D425 cells, EYA2 shRNA#6, rep 3
Group 3 MB D425 cells, EYA2 shRNA#8, rep 2
Group 3 MB D458 cells, non-targeting control, rep 2
Group 3 MB D458 cells, non-targeting control, rep 1
Group 3 MB D425 cells, non-targeting control, rep 1
Heatmap of the expression data of PolyA RNA-seq from Medulloblastoma cells ± EYA2 knockdown. The rows correspond to genes and columns to assays.
LOC124905148
LOC102724687
LOC112268271
LOC124901580
VIPR2
POU4F3
LINC01433
HOXB8
TRIM55
UPF3B
LOC124903601
SH2D1B
FAM236B
MYCNOS
LOC105374179
LOC124903935
SEC14L4
LOC105372981
PCAT18
MIR5681B