alpha-beta T cell (subset of GSE15390 - FOXP3-mediated inhibition of the global gene regulator SATB1 is required for maintaining regulatory T cell commitment, see all subsets)
Annotations: | VEGFA [human] vascular endothelial growth factor A, biotin, culture medium, IL10 [human] interleukin 10, B-cell chronic lymphocytic leukemia, CD4-positive, alpha-beta T cell, PDCD1 [human] programmed cell death 1, prostaglandin E2, SUBSET, IL2 [human] interleukin 2, CTLA4 [human] cytotoxic T-lymphocyte associated protein 4, transcription profiling by array assay, TGFB1 [human] transforming growth factor beta 1, CD28 [human] CD28 molecule | ||||||
Description: |
Regulatory T (Treg) cells are involved in self tolerance, immune homeostasis, prevention of autoimmunity, and suppression of immunity to pathogens or tumours. The forkhead transcription factor FOXP3 is essential for Treg cell development and function as mutations in FOXP3 cause severe autoimmunity in mice and humans. However, the FOXP3-dependent molecular mechanisms leading to this severe phenotype are not well understood. Here we introduce the chromatin remodelling enzyme SATB1 (special AT-rich sequence-binding protein-1) as an important target gene of FOXP3. So far, SATB1 has been associated with normal thymic T-cell development, peripheral T-cell homeostasis, TH1/TH2 polarization, and reprogramming of gene expression. In natural and induced murine and human FOXP3+ Treg cells SATB1 expression is significantly reduced. While there is no differential epigenetic regulation of the SATB1 locus between Treg and Teffector cells, FOXP3 reduces SATB1 expression directly as a transcriptional repressor at the SATB1 locus and indirectly via miR-155 induction, which specifically binds to the 3’UTR of the SATB1 mRNA. Reduced SATB1 expression in FOXP3+ cells achieved either by overexpression or induction of FOXP3 is linked to significant reduction in TH1 and TH2 cytokines, while loss of FOXP3 function either by knock down or genetic mutation leads to significant upregulation of SATB1 and subsequent cytokine production. Alltogether, these findings demonstrate that reduced SATB1 expression in Treg cells is necessary for maintenance of a Treg-cell phenotype in vitro and in vivo and places SATB1-mediated T cell-specific modulation of global chromatin remodelling central during the decision process between effector and regulatory T-cell function.
Last Updated (by provider): Nov 14 2011
Contributors: Marc Beyer S Classen J Schultze (inherited)
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Accession: |
GSE15390 ![]() |
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Publication: |
Beyer, Marc et al. (2011) ![]() ![]() |
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Dimension: | 4518 (83/149 samples) | ||||||
Other subsets: | Assays: |
Unmapped: GI_42658506-S Unmapped: hmm23642-S GML Unmapped: hmm27981-S TBRG4 NEK5 Unmapped: hmm32658-S Unmapped: Hs.321612-S DDX3X Unmapped: Hs.459675-S Unmapped: GI_41209810-S RABAC1 Unmapped: Hs.466063-S Unmapped: GI_20538828-S Unmapped: GI_37541238-S Unmapped: hmm35471-S Unmapped: Hs.485824-S MESP2 Unmapped: GI_17437660-S Unmapped: GI_42655996-S 22_7_CD4+ 0h 22_6_CD4+ 0h 22_5_CD4+ 0h 22_4_CD4+ 0h 20_6_Tconv 20h 20_5_Tconv 20h 20_4_Tconv 20h 17_4_Tconv_12h 16_4_CD4 T cells 14_4_20h+10ng TGF 13_4_20h+1ng TGF 8_4_CD3 7_4_CTLA4 5_4_PGE2 4_4_IL10 3_4_VEGF 2_4_TGF_1 1_4_CD3CD28 21_3_Tconv 18+8hrs 21_2_Tconv 18+8hrs 21_1_Tconv 18+8hrs 19_1_Tconv 18+1hrs 19_2_Tconv 18+1hrs 19_3_Tconv 18+1hrs 10_1_Tconv 18+1hrs TGF 10_2_Tconv 18+1hrs TGF 10_3_Tconv 18+1hrs TGF 6_4_PD1 5_1_PGE2 5_3_PGE2 2_3_TGF_3 2_1_TGF_1 5_2_PGE2 2_2_TGF_2 18_1_Tconv_18h 18_2_Tconv_18h 18_3_Tconv_18h 4_1_IL10 4_3_IL10 16_1_CD4 T cells 16_3_CD4 T cells 4_2_IL10 16_2_CD4 T cells 14_2_20h+10ng TGF 14_1_20h+10ng TGF 14_3_20h+10ng TGF 17_3_Tconv_12h 17_2_Tconv_12h 17_1_Tconv_12h 3_1_VEGF 3_3_VEGF 3_2_VEGF 13_2_20h+1ng TGF 13_1_20h+1ng TGF 13_3_20h+1ng TGF 7_3_CTLA4 7_1_CTLA4 7_2_CTLA4 1_3_CD3CD28 1_2_CD3CD28 1_1_CD3CD28 8_3_CD3 8_2_CD3 8_1_CD3 15_3_Tconv + TGF 37_2_aCD4+CD25+ Treg CLL 15_2_Tconv + TGF 15_1_Tconv + TGF 20_1_Tconv 20h 20_2_Tconv 20h 20_3_Tconv 20h 6_2_PD1 6_1_PD1 6_3_PD1 12_2_Tconv 18+8hrs TGF 11_2_Tconv 18+2hrs TGF 12_3_Tconv 18+8hrs TGF 11_3_Tconv 18+2hrs TGF 12_1_Tconv 18+8hrs TGF 11_1_Tconv 18+2hrs TGF 22_3_CD4+ 0h 22_2_CD4+ 0h 22_1_CD4+ 0h |
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Annotations: |
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