Package ubic.gemma.core.analysis.expression.diff

Enum DifferentialExpressionAnalyzerServiceImpl.AnalysisType

java.lang.Object

java.lang.Enum<DifferentialExpressionAnalyzerServiceImpl.AnalysisType>

ubic.gemma.core.analysis.expression.diff.DifferentialExpressionAnalyzerServiceImpl.AnalysisType

All Implemented Interfaces:

Serializable, Comparable<DifferentialExpressionAnalyzerServiceImpl.AnalysisType>

Enclosing class:

DifferentialExpressionAnalyzerServiceImpl

public static enum DifferentialExpressionAnalyzerServiceImpl.AnalysisType
extends Enum<DifferentialExpressionAnalyzerServiceImpl.AnalysisType>

Defines the different types of analyses our linear modeling framework supports:

• GENERICLM - generic linear regression (interactions are omitted, but this could change)
• OSTTEST - one sample t-test
• OWA - one-way ANOVA
• TTEST - two sample t-test
• TWO_WAY_ANOVA_WITH_INTERACTION
• TWO_WAY_ANOVA_NO_INTERACTION

Author:

Paul

Enum Constant Summary

Enum Constants

Enum Constant	Description
GENERICLM
OSTTEST
OWA
TTEST
TWO_WAY_ANOVA_NO_INTERACTION
TWO_WAY_ANOVA_WITH_INTERACTION

Method Summary

Modifier and Type	Method	Description
static DifferentialExpressionAnalyzerServiceImpl.AnalysisType	valueOf(String name)	Returns the enum constant of this type with the specified name.
static DifferentialExpressionAnalyzerServiceImpl.AnalysisType[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

GENERICLM

public static final DifferentialExpressionAnalyzerServiceImpl.AnalysisType GENERICLM

OSTTEST

public static final DifferentialExpressionAnalyzerServiceImpl.AnalysisType OSTTEST

OWA

public static final DifferentialExpressionAnalyzerServiceImpl.AnalysisType OWA

TTEST

public static final DifferentialExpressionAnalyzerServiceImpl.AnalysisType TTEST

TWO_WAY_ANOVA_WITH_INTERACTION

public static final DifferentialExpressionAnalyzerServiceImpl.AnalysisType TWO_WAY_ANOVA_WITH_INTERACTION

TWO_WAY_ANOVA_NO_INTERACTION

public static final DifferentialExpressionAnalyzerServiceImpl.AnalysisType TWO_WAY_ANOVA_NO_INTERACTION

Method Detail

values

public static DifferentialExpressionAnalyzerServiceImpl.AnalysisType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (DifferentialExpressionAnalyzerServiceImpl.AnalysisType c : DifferentialExpressionAnalyzerServiceImpl.AnalysisType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static DifferentialExpressionAnalyzerServiceImpl.AnalysisType valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null