Package ubic.gemma.core.analysis.preprocess.filter
-
Class Summary Class Description AffyProbeNameFilter ExpressionExperimentFilter Methods to handle filtering expression experiments for analysis.FilterConfig Holds settings for filtering.RowLevelFilter RowMissingValueFilter Filter out rows that have "too many" missing values.RowsWithSequencesFilter Remove rows that have no BioSequence associated with the row. -
Enum Summary Enum Description AffyProbeNameFilter.Pattern RowLevelFilter.Method -
Exception Summary Exception Description FilteringException InsufficientDataException Used to indicate that analysis was skipped, not necessarily an error.InsufficientSamplesException NoRowsLeftAfterFilteringException This is a special kind of preprocessing exception that occurs when filtering the expression data matrix result in no rows left.