Package ubic.gemma.core.analysis.report

Class DatabaseViewGeneratorImpl

java.lang.Object

ubic.gemma.core.analysis.report.DatabaseViewGeneratorImpl

All Implemented Interfaces:

DatabaseViewGenerator

@Component
public class DatabaseViewGeneratorImpl
extends Object
implements DatabaseViewGenerator

Generates textual views of the database so other people can use the data. Development of this was started due to the collaboration with NIF. It is essential that these views be created by a principal with Anonymous status, so as not to create views of private data (that could be done, but would be separate).

Author:

paul

Field Summary

Fields inherited from interface ubic.gemma.core.analysis.report.DatabaseViewGenerator

VIEW_DIR, VIEW_FILE_SUFFIX

Constructor Summary

Constructors

Constructor	Description
DatabaseViewGeneratorImpl()

Method Summary

Modifier and Type	Method	Description
File	getOutputFile(String filename)
void	runAll()
void	runAll(Integer limit)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

DatabaseViewGeneratorImpl

public DatabaseViewGeneratorImpl()

Method Details

getOutputFile

public File getOutputFile(String filename)

Specified by:

getOutputFile in interface DatabaseViewGenerator

runAll

public void runAll()

Specified by:

runAll in interface DatabaseViewGenerator

runAll

public void runAll(Integer limit)

Specified by:

runAll in interface DatabaseViewGenerator

Parameters:

limit - if null will run against every dataset in Gemma else will only do the 1st to the given limit