@ParametersAreNonnullByDefault
Package ubic.gemma.core.analysis.singleCell.aggregate
This packge contains classes for splitting and aggregating single-cell data.
- Author:
- poirigui
-
Interface Summary Interface Description SingleCellExpressionExperimentAggregatorService Aggregate single-cell vectors.SingleCellExpressionExperimentSplitAndAggregateService High-level service for splitting and aggregating single-cell expression experiments.SingleCellExpressionExperimentSplitService Split a single-cell expression experiment into sub-experiments by cell type. -
Class Summary Class Description AggregateConfig Configuration for aggregating single-cell data.CellLevelCharacteristicsMappingUtils Utilities for creating, reading and writing mappings ofCellLevelCharacteristicstoExperimentalFactor.SingleCellDataVectorAggregatorUtils Utilities for aggregating single-cell data vectors.SingleCellExpressionExperimentAggregatorServiceImpl Aggregates single-cell expression data.SingleCellExpressionExperimentSplitAndAggregateServiceImpl SingleCellExpressionExperimentSplitServiceImpl SplitConfig Configuration for splitting single-cell expression data in pseudo-bulks. -
Enum Summary Enum Description SingleCellDataVectorAggregatorUtils.SingleCellAggregationMethod SingleCellExpressionExperimentAggregatorServiceImpl.SingleCellExpressionAggregationMethod Methods for aggregating single-cell expression data. -
Exception Summary Exception Description AggregationException Exception raised when aggregation fails.UnsupportedScaleTypeForAggregationException