Uses of Class
ubic.gemma.core.genome.gene.GOGroupValueObject
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Packages that use GOGroupValueObject Package Description ubic.gemma.core.genome.gene ubic.gemma.core.search ubic.gemma.web.controller.genome.gene -
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Uses of GOGroupValueObject in ubic.gemma.core.genome.gene
Methods in ubic.gemma.core.genome.gene that return GOGroupValueObject Modifier and Type Method Description GOGroupValueObject
GeneSetValueObjectHelper. convertToGOValueObject(GeneSet gs, String goId, String searchTerm)
Method to create a GO group object from an ad hoc entityGOGroupValueObject
GeneSetValueObjectHelperImpl. convertToGOValueObject(GeneSet gs, String goId, String searchTerm)
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Uses of GOGroupValueObject in ubic.gemma.core.search
Methods in ubic.gemma.core.search that return GOGroupValueObject Modifier and Type Method Description GOGroupValueObject
GeneSetSearch. findGeneSetValueObjectByGoId(String goId, Long taxonId)
Finds gene sets by exact match to goTermId eg: GO:0000002 Note: the gene set returned is not persistent.GOGroupValueObject
GeneSetSearchImpl. findGeneSetValueObjectByGoId(String goId, Long taxonId)
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Uses of GOGroupValueObject in ubic.gemma.web.controller.genome.gene
Methods in ubic.gemma.web.controller.genome.gene that return GOGroupValueObject Modifier and Type Method Description GOGroupValueObject
GenePickerController. getGeneSetByGOId(String goId, Long taxonId)
for AJAX get a gene set with all genes in the given taxon that are annotated with the given go id, including its child terms in the hierarchy
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