Uses of Package
ubic.gemma.core.loader.expression.singleCell.transform

Packages that use ubic.gemma.core.loader.expression.singleCell.transform

Package	Description
ubic.gemma.core.loader.expression.cellxgene	This package contains classes for loading expression data from CELLxGENE.
ubic.gemma.core.loader.expression.geo.singleCell	This package contains specific logic for dealing with single-cell data from GEO.
ubic.gemma.core.loader.expression.singleCell	This package contains classes for loading single-cell expression data.
ubic.gemma.core.loader.expression.singleCell.transform	This package contains classes for transforming single-cell expression data.

Classes in ubic.gemma.core.loader.expression.singleCell.transform used by ubic.gemma.core.loader.expression.cellxgene

Class	Description
SingleCellDataTransformationFactory

Classes in ubic.gemma.core.loader.expression.singleCell.transform used by ubic.gemma.core.loader.expression.geo.singleCell

Class	Description
SingleCellDataTransformationFactory

Classes in ubic.gemma.core.loader.expression.singleCell.transform used by ubic.gemma.core.loader.expression.singleCell

Class	Description
SingleCellDataTransformationFactory

Classes in ubic.gemma.core.loader.expression.singleCell.transform used by ubic.gemma.core.loader.expression.singleCell.transform

Class	Description
AbstractCellRangerBasedTransformation
AbstractPythonScriptBasedAnnDataTransformation
AbstractPythonScriptBasedTransformation
AbstractScriptBasedTransformation
CellRangerBasedTransformation
PythonBasedSingleCellDataTransformation	Interface implemented by single-cell data transformation that require Python.
SingleCell10xMexFilter	Filter 10x Chromium Sequencing data to remove low-quality cells.
SingleCellDataPack	Pack an AnnData object by removing unnecessary zeroes.
SingleCellDataRewrite
SingleCellDataSample
SingleCellDataSortBySample
SingleCellDataSparsify
SingleCellDataTransformation	Represents a single-cell data transformation.
SingleCellDataTransformationFactory
SingleCellDataTransformationPipeline
SingleCellDataTranspose	Transpose a single-cell dataset.
SingleCellDataUnraw
SingleCellInputOutputFileTransformation	Simple transformation with input and output files.