Package ubic.gemma.core.loader.util

Class MatrixMarketUtils

java.lang.Object

ubic.gemma.core.loader.util.MatrixMarketUtils

public class MatrixMarketUtils
extends Object

Utilities for reading MatrixMarket format.

Author:

poirigui

Constructor Summary

Constructors

Constructor	Description
MatrixMarketUtils()

Method Summary

Modifier and Type	Method	Description
static int[]	getNonEmptyColumns(Path path)	Obtain the position of non-empty columns for a given matrix.
static no.uib.cipr.matrix.io.MatrixVectorReader	readMatrixMarketFromPath(Path path)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

MatrixMarketUtils

public MatrixMarketUtils()

Method Details

readMatrixMarketFromPath

public static no.uib.cipr.matrix.io.MatrixVectorReader readMatrixMarketFromPath(Path path)
                                                                         throws IOException

Throws:

IOException

getNonEmptyColumns

public static int[] getNonEmptyColumns(Path path)
                                throws IOException

Obtain the position of non-empty columns for a given matrix.

Throws:

IOException