Package ubic.gemma.core.loader.util.parser

Class ExternalDatabaseUtils

java.lang.Object

ubic.gemma.core.loader.util.parser.ExternalDatabaseUtils

@Component
public class ExternalDatabaseUtils
extends Object

Provides convenience methods to provide ExternalDatabases and DatabaseEntries for common cases, such as Genbank.

Author:

pavlidis

Constructor Summary

Constructors

Constructor	Description
ExternalDatabaseUtils()

Method Summary

Modifier and Type	Method	Description
static DatabaseEntry	getGenbankAccession(String accession)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ExternalDatabaseUtils

public ExternalDatabaseUtils()

Method Details

getGenbankAccession

public static DatabaseEntry getGenbankAccession(String accession)

Parameters:

accession - in the form XXXXXX or XXXXX.N where N is a version number. The first part becomes the accession, the second the version

Returns:

a DatabaseEntry representing the genbank accession.