Class ExternalDatabaseUtils


  • @Component
    public class ExternalDatabaseUtils
    extends Object
    Provides convenience methods to provide ExternalDatabases and DatabaseEntries for common cases, such as Genbank.
    Author:
    pavlidis
    • Constructor Detail

      • ExternalDatabaseUtils

        public ExternalDatabaseUtils()
    • Method Detail

      • getGenbankAccession

        public static DatabaseEntry getGenbankAccession​(String accession)
        Parameters:
        accession - in the form XXXXXX or XXXXX.N where N is a version number. The first part becomes the accession, the second the version
        Returns:
        a DatabaseEntry representing the genbank accession.