Package ubic.gemma.core.ontology

Class FactorValueOntologyServiceImpl

java.lang.Object

ubic.gemma.core.ontology.FactorValueOntologyServiceImpl

All Implemented Interfaces:

FactorValueOntologyService

@Service
public class FactorValueOntologyServiceImpl
extends Object
implements FactorValueOntologyService

Nested Class Summary

Nested classes/interfaces inherited from interface ubic.gemma.core.ontology.FactorValueOntologyService

FactorValueOntologyService.OntologyStatement

Constructor Summary

Constructors

Constructor	Description
FactorValueOntologyServiceImpl(FactorValueService factorValueService)

Method Summary

Modifier and Type	Method	Description
Set<OntologyIndividual>	getFactorValueAnnotations(String uri)	Obtain annotations belonging to the given URI representing a factor value.
Set<FactorValueOntologyService.OntologyStatement>	getFactorValueStatements(String uri)	Obtain statements related to the given URI representing a factor value.
OntologyIndividual	getIndividual(String uri)	Obtain an individual from the ontology by URI.
void	writeToRdf(String uri, Writer writer)	Write a small RDF model for a given factor value or annotation.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FactorValueOntologyServiceImpl

@Autowired
public FactorValueOntologyServiceImpl(FactorValueService factorValueService)

Method Detail

getIndividual

@Nullable
public OntologyIndividual getIndividual(String uri)

Description copied from interface: FactorValueOntologyService

Obtain an individual from the ontology by URI.

Specified by:

getIndividual in interface FactorValueOntologyService

getFactorValueAnnotations

public Set<OntologyIndividual> getFactorValueAnnotations(String uri)

Description copied from interface: FactorValueOntologyService

Obtain annotations belonging to the given URI representing a factor value.

Specified by:

getFactorValueAnnotations in interface FactorValueOntologyService

getFactorValueStatements

public Set<FactorValueOntologyService.OntologyStatement> getFactorValueStatements(String uri)

Description copied from interface: FactorValueOntologyService

Obtain statements related to the given URI representing a factor value.

Specified by:

getFactorValueStatements in interface FactorValueOntologyService

writeToRdf

public void writeToRdf(String uri,
                       Writer writer)

Write a small RDF model for a given factor value or annotation.

Specified by:

writeToRdf in interface FactorValueOntologyService