Package ubic.gemma.core.ontology.providers

Class GemmaOntologyService

java.lang.Object

ubic.basecode.ontology.providers.AbstractDelegatingOntologyService

ubic.gemma.core.ontology.providers.GemmaOntologyService

All Implemented Interfaces:

AutoCloseable, OntologyService

public class GemmaOntologyService
extends AbstractDelegatingOntologyService

Ontology created for Gemma. See bug 4312

Author:

paul

Nested Class Summary

Nested classes/interfaces inherited from interface ubic.basecode.ontology.providers.OntologyService

OntologyService.InferenceMode, OntologyService.LanguageLevel

Constructor Summary

Constructors

Constructor	Description
GemmaOntologyService()

Method Summary

Modifier and Type	Method	Description
String	getOntologyUrl()

Methods inherited from class ubic.basecode.ontology.providers.AbstractDelegatingOntologyService

cancelInitializationThread, close, findIndividuals, findResources, findTerm, findUsingAlternativeId, getAdditionalPropertyUris, getAllURIs, getChildren, getDescription, getExcludedWordsFromStemming, getInferenceMode, getLanguageLevel, getName, getParents, getProcessImports, getResource, getTerm, getTermIndividuals, index, initialize, initialize, isEnabled, isInitializationThreadAlive, isInitializationThreadCancelled, isOntologyLoaded, isSearchEnabled, loadTermsInNameSpace, setAdditionalPropertyUris, setExcludedWordsFromStemming, setInferenceMode, setLanguageLevel, setProcessImports, setSearchEnabled, startInitializationThread, toString, waitForInitializationThread

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface ubic.basecode.ontology.providers.OntologyService

findIndividuals, findResources, findTerm, getChildren, getParents

Constructor Details

GemmaOntologyService

public GemmaOntologyService()

Method Details

getOntologyUrl

public String getOntologyUrl()