Package ubic.gemma.core.visualization.cellbrowser

Class CellBrowserUtils

java.lang.Object

ubic.gemma.core.visualization.cellbrowser.CellBrowserUtils

public class CellBrowserUtils
extends Object

Constructor Summary

Constructors

Constructor	Description
CellBrowserUtils()

Method Summary

Modifier and Type	Method	Description
static String	constructCellId(BioAssay bioAssay, String cellId, boolean useBioAssayIds, boolean useRawColumnNames)	Construct a cell ID for the Cell Browser.
static String	constructDatasetName(ExpressionExperiment ee)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

CellBrowserUtils

public CellBrowserUtils()

Method Details

constructDatasetName

public static String constructDatasetName(ExpressionExperiment ee)

constructCellId

public static String constructCellId(BioAssay bioAssay,
 String cellId,
 boolean useBioAssayIds,
 boolean useRawColumnNames)

Construct a cell ID for the Cell Browser.

Parameters:

useBioAssayIds - use the BioAssay ID as the sample ID instead of the short name (or name)

useRawColumnNames - if true, the sample ID and cell ID will be concatenanted as-is, otherwise StringUtil.makeNames(String) will be used it make it R-friendly