Class Chromosome

    • Constructor Detail

      • Chromosome

        public Chromosome()
        No-arg constructor added to satisfy javabean contract
      • Chromosome

        public Chromosome​(String name,
                          Taxon taxon)
    • Method Detail

      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class Object
      • getAssemblyDatabase

        public ExternalDatabase getAssemblyDatabase()
        Returns:
        The database where we have the assesmbly of the chromosome, such as the GoldenPath.
      • getName

        public String getName()
      • getSequence

        public BioSequence getSequence()
        Returns:
        The sequence of the chromosome. This is typically going to be just a reference to the sequence in an external database.
      • getTaxon

        public Taxon getTaxon()