Package ubic.gemma.persistence.service.common.description

Class DatabaseEntryDaoImpl

java.lang.Object

ubic.gemma.persistence.service.AbstractDao<DatabaseEntry>

ubic.gemma.persistence.service.AbstractVoEnabledDao<DatabaseEntry,DatabaseEntryValueObject>

ubic.gemma.persistence.service.AbstractNoopFilteringVoEnabledDao<DatabaseEntry,DatabaseEntryValueObject>

ubic.gemma.persistence.service.common.description.DatabaseEntryDaoImpl

All Implemented Interfaces:

BaseDao<DatabaseEntry>, BaseVoEnabledDao<DatabaseEntry,DatabaseEntryValueObject>, DatabaseEntryDao, FilteringDao<DatabaseEntry>, FilteringVoEnabledDao<DatabaseEntry,DatabaseEntryValueObject>

@Repository
public class DatabaseEntryDaoImpl
extends AbstractNoopFilteringVoEnabledDao<DatabaseEntry,DatabaseEntryValueObject>
implements DatabaseEntryDao

Base Spring DAO Class: is able to create, update, remove, load, and find objects of type DatabaseEntry.

See Also:

• DatabaseEntry

Field Summary

Fields inherited from class ubic.gemma.persistence.service.AbstractVoEnabledDao

REPORT_SLOW_QUERY_AFTER_MS

Fields inherited from class ubic.gemma.persistence.service.AbstractDao

log

Fields inherited from interface ubic.gemma.persistence.service.common.description.DatabaseEntryDao

OBJECT_ALIAS

Constructor Summary

Constructors

Constructor	Description
DatabaseEntryDaoImpl(SessionFactory sessionFactory)

Method Summary

Modifier and Type	Method	Description
protected DatabaseEntryValueObject	doLoadValueObject(DatabaseEntry entity)	Load a value object for a given entity.
List<DatabaseEntry>	findByAccession(String accession)

Methods inherited from class ubic.gemma.persistence.service.AbstractNoopFilteringVoEnabledDao

count, getFilter, getFilter, getFilter, getFilter, getFilter, getFilter, getFilterableProperties, getFilterablePropertyAllowedValues, getFilterablePropertyDescription, getFilterablePropertyIsUsingSubquery, getFilterablePropertyType, getSort, load, load, loadIds, loadValueObjects, loadValueObjects

Methods inherited from class ubic.gemma.persistence.service.AbstractVoEnabledDao

doLoadValueObjects, loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds, postProcessValueObjects

Methods inherited from class ubic.gemma.persistence.service.AbstractDao

countAll, create, create, find, findByProperty, findByPropertyIn, findOneByProperty, findOrCreate, getBatchSize, getElementClass, getIdentifierPropertyName, getSessionFactory, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, streamQuery, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, getIdentifierPropertyName, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledDao

loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Methods inherited from interface ubic.gemma.persistence.service.FilteringDao

count, getFilter, getFilter, getFilter, getFilter, getFilter, getFilter, getFilterableProperties, getFilterablePropertyAllowedValues, getFilterablePropertyDescription, getFilterablePropertyIsUsingSubquery, getFilterablePropertyType, getSort, load, load, loadIds

Methods inherited from interface ubic.gemma.persistence.service.FilteringVoEnabledDao

loadValueObjects, loadValueObjects

Constructor Details

DatabaseEntryDaoImpl

@Autowired
public DatabaseEntryDaoImpl(SessionFactory sessionFactory)

Method Details

findByAccession

public List<DatabaseEntry> findByAccession(String accession)

Specified by:

findByAccession in interface DatabaseEntryDao

doLoadValueObject

protected DatabaseEntryValueObject doLoadValueObject(DatabaseEntry entity)

Description copied from class: AbstractVoEnabledDao

Load a value object for a given entity.

This should be fast and efficient, and avoid any database query or post-processing. If you need to perform additional queries, implement AbstractVoEnabledDao.postProcessValueObjects(List) instead.

Specified by:

doLoadValueObject in class AbstractVoEnabledDao<DatabaseEntry,DatabaseEntryValueObject>