TaxonDao (Gemma 1.31.13 API)

All Superinterfaces:

BaseDao<Taxon>, BaseVoEnabledDao<Taxon,TaxonValueObject>, FilteringDao<Taxon>, FilteringVoEnabledDao<Taxon,TaxonValueObject>

All Known Implementing Classes:

TaxonDaoImpl
```
public interface TaxonDao
extends FilteringVoEnabledDao<Taxon,TaxonValueObject>
```
See Also:

Taxon

Field Summary

Fields
Modifier and Type Field Description

static String OBJECT_ALIAS

Method Summary

All Methods Instance Methods Abstract Methods
Modifier and Type	Method	Description
`Taxon`	`findByCommonName(String commonName)`
`Taxon`	`findByNcbiId(Integer ncbiId)`
`Taxon`	`findByScientificName(String scientificName)`	Searches for a taxon by its scientific name, case insensitive.
`Collection<Taxon>`	`findTaxonUsedInEvidence()`

Methods inherited from interface ubic.gemma.persistence.service.BaseDao
countAll, create, create, find, findOrCreate, getElementClass, getIdentifierPropertyName, load, load, loadAll, loadReference, loadReference, remove, remove, remove, save, save, update, update

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledDao
loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Methods inherited from interface ubic.gemma.persistence.service.FilteringDao
count, getFilter, getFilter, getFilter, getFilter, getFilter, getFilter, getFilterableProperties, getFilterablePropertyAllowedValues, getFilterablePropertyDescription, getFilterablePropertyIsUsingSubquery, getFilterablePropertyType, getSort, load, load, loadIds

Methods inherited from interface ubic.gemma.persistence.service.FilteringVoEnabledDao
loadValueObjects, loadValueObjects

- Field Detail
  - OBJECT_ALIAS
```
static final String OBJECT_ALIAS
```
    See Also:
    
    Constant Field Values
- Method Detail
  - findByCommonName
```
Taxon findByCommonName(String commonName)
```
  - findByScientificName
```
Taxon findByScientificName(String scientificName)
```
    Searches for a taxon by its scientific name, case insensitive.
    
    Parameters:
    
    scientificName - the scientific name to be matched
    
    Returns:
    
    a Taxon whose scientific name matches the given string.
  - findTaxonUsedInEvidence
```
Collection<Taxon> findTaxonUsedInEvidence()
```
  - findByNcbiId
```
Taxon findByNcbiId(Integer ncbiId)
```