Class CoexpressionSearchController
- java.lang.Object
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- ubic.gemma.web.controller.coexpressionSearch.CoexpressionSearchController
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@Controller public class CoexpressionSearchController extends Object
- Author:
- luke, paul
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Constructor Summary
Constructors Constructor Description CoexpressionSearchController()
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description String
doBackgroundCoexSearch(CoexpressionSearchCommand searchOptions)
Used by CoexpressionSearchData.js - the main home page coexpression search.CoexpressionMetaValueObject
doSearch(CoexpressionSearchCommand searchOptions)
Important entry point - called by the CoexpressionSearchTaskCoexpressionMetaValueObject
doSearchQuickComplete(CoexpressionSearchCommand searchOptions, Collection<Long> queryGeneIds)
Do a search that fills in the edges among the genes already found.
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Method Detail
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doBackgroundCoexSearch
public String doBackgroundCoexSearch(CoexpressionSearchCommand searchOptions)
Used by CoexpressionSearchData.js - the main home page coexpression search.- Parameters:
searchOptions
- search options- Returns:
- string
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doSearch
public CoexpressionMetaValueObject doSearch(CoexpressionSearchCommand searchOptions)
Important entry point - called by the CoexpressionSearchTask- Parameters:
searchOptions
- search options- Returns:
- coexp. meta VO
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doSearchQuickComplete
public CoexpressionMetaValueObject doSearchQuickComplete(CoexpressionSearchCommand searchOptions, Collection<Long> queryGeneIds)
Do a search that fills in the edges among the genes already found. Maps to doSearchQuickComplete in javascript.- Parameters:
searchOptions
- search optionsqueryGeneIds
- the genes which were used originally to start the search- Returns:
- coexp meta VO
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