Package ubic.gemma.web.controller.genome

Class BlatResultTrackController

java.lang.Object
org.springframework.context.support.ApplicationObjectSupport
org.springframework.web.context.support.WebApplicationObjectSupport
org.springframework.web.servlet.support.WebContentGenerator
org.springframework.web.servlet.mvc.AbstractController
ubic.gemma.web.controller.genome.BlatResultTrackController
All Implemented Interfaces:
org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware, org.springframework.web.context.ServletContextAware, org.springframework.web.servlet.mvc.Controller
@Controller public class BlatResultTrackController extends org.springframework.web.servlet.mvc.AbstractController
See goldenPath help on custom track. This simply generates text that can be used to view our alignments in the UCSC browser. For example, urls like the following would work:

also this

Where the 'id' is the id in our system of the BLAT result to be views, and www.example.ca should be replaced with ConfigUtils.getBaseUrl() (configured with gemma.baseurl)
Author:
pavlidis

  • Field Summary

    Fields inherited from class org.springframework.web.servlet.support.WebContentGenerator

    METHOD_GET, METHOD_HEAD, METHOD_POST

    Fields inherited from class org.springframework.context.support.ApplicationObjectSupport

    logger

  • Constructor Summary

    Constructors
    Constructor
    Description
    BlatResultTrackController()
     

  • Method Summary

    Modifier and Type
    Method
    Description
    protected org.springframework.web.servlet.ModelAndView
    handleRequestInternal(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
     

    Methods inherited from class org.springframework.web.servlet.mvc.AbstractController

    handleRequest, isSynchronizeOnSession, setSynchronizeOnSession

    Methods inherited from class org.springframework.web.servlet.support.WebContentGenerator

    applyCacheSeconds, applyCacheSeconds, cacheForSeconds, cacheForSeconds, checkAndPrepare, checkAndPrepare, getCacheSeconds, getSupportedMethods, isAlwaysMustRevalidate, isRequireSession, isUseCacheControlHeader, isUseCacheControlNoStore, isUseExpiresHeader, preventCaching, setAlwaysMustRevalidate, setCacheSeconds, setRequireSession, setSupportedMethods, setUseCacheControlHeader, setUseCacheControlNoStore, setUseExpiresHeader

    Methods inherited from class org.springframework.web.context.support.WebApplicationObjectSupport

    getServletContext, getTempDir, getWebApplicationContext, initApplicationContext, initServletContext, isContextRequired, setServletContext

    Methods inherited from class org.springframework.context.support.ApplicationObjectSupport

    getApplicationContext, getMessageSourceAccessor, initApplicationContext, requiredContextClass, setApplicationContext

    Methods inherited from class java.lang.Object

    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

  • Constructor Details

    • BlatResultTrackController

      public BlatResultTrackController()

  • Method Details

    • handleRequestInternal

      protected org.springframework.web.servlet.ModelAndView handleRequestInternal(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
      Specified by:
      handleRequestInternal in class org.springframework.web.servlet.mvc.AbstractController