Package ubic.gemma.web.controller.genome

Class BlatResultTrackController

java.lang.Object

org.springframework.context.support.ApplicationObjectSupport

org.springframework.web.context.support.WebApplicationObjectSupport

org.springframework.web.servlet.support.WebContentGenerator

org.springframework.web.servlet.mvc.AbstractController

ubic.gemma.web.controller.genome.BlatResultTrackController

All Implemented Interfaces:

Aware, ApplicationContextAware, ServletContextAware, Controller

@Controller
public class BlatResultTrackController
extends AbstractController

See goldenPath help on custom track. This simply generates text that can be used to view our alignments in the UCSC browser. For example, urls like the following would work:

also this

Where the 'id' is the id in our system of the BLAT result to be views, and www.example.ca should be replaced with ConfigUtils.getBaseUrl() (configured with gemma.baseurl)

Author:

pavlidis

Field Summary

Fields inherited from class org.springframework.web.servlet.support.WebContentGenerator

METHOD_GET, METHOD_HEAD, METHOD_POST

Fields inherited from class org.springframework.context.support.ApplicationObjectSupport

logger

Constructor Summary

Constructors

Constructor	Description
BlatResultTrackController()

Method Summary

Modifier and Type	Method	Description
protected ModelAndView	handleRequestInternal(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)

Methods inherited from class org.springframework.web.servlet.mvc.AbstractController

handleRequest, isSynchronizeOnSession, setSynchronizeOnSession

Methods inherited from class org.springframework.web.servlet.support.WebContentGenerator

applyCacheSeconds, applyCacheSeconds, cacheForSeconds, cacheForSeconds, checkAndPrepare, checkAndPrepare, getCacheSeconds, getSupportedMethods, isAlwaysMustRevalidate, isRequireSession, isUseCacheControlHeader, isUseCacheControlNoStore, isUseExpiresHeader, preventCaching, setAlwaysMustRevalidate, setCacheSeconds, setRequireSession, setSupportedMethods, setUseCacheControlHeader, setUseCacheControlNoStore, setUseExpiresHeader

Methods inherited from class org.springframework.web.context.support.WebApplicationObjectSupport

getServletContext, getTempDir, getWebApplicationContext, initApplicationContext, initServletContext, isContextRequired, setServletContext

Methods inherited from class org.springframework.context.support.ApplicationObjectSupport

getApplicationContext, getMessageSourceAccessor, initApplicationContext, requiredContextClass, setApplicationContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BlatResultTrackController

public BlatResultTrackController()

Method Detail

handleRequestInternal

protected ModelAndView handleRequestInternal(javax.servlet.http.HttpServletRequest request,
                                             javax.servlet.http.HttpServletResponse response)

Specified by:

handleRequestInternal in class AbstractController