Package ubic.basecode.dataStructure.matrix

Interface Summary

Interface	Description
Matrix2D<R,C,V>	Represents a matrix with index columns and rows.
Matrix3D<R,C,S,V>
ObjectMatrix<R,C,V>
PrimitiveMatrix<R,C,V>	Matrix that holds primitives, with an available object representation of the values.

Class Summary

Class	Description
AbstractMatrix<R,C,V>
AbstractMatrix3D<R,C,S,V>	TODO Document Me
CompressedBitMatrix<R,C>	Named compressed sparse bit matrix.
CompressedSparseDoubleMatrix<R,C>	Supports sparse matrices (where sparse means most values are zero, not that they are missing).
DenseDouble3dMatrix<R,C,S>
DenseDoubleMatrix<R,C>	A dense matrix of doubles that knows about row and column names.
DenseDoubleMatrix1D	Use this class when fast iteration over the matrix is of primary interest.
DenseObject3DMatrix<R,C,S>
DoubleMatrix<R,C>	Abstract base class for 2D matrices of double values with named columns and rows.
DoubleMatrix3D<R,C,S>	TODO Document Me
DoubleMatrixFactory	Use this factory to create matrices of type selected at runtime (String parameterization only)
FastRowAccessDoubleMatrix<R,C>	Dense 2D matrix implementation designed for very fast access of entire rows.
IntegerMatrix<R,C>
MatrixUtil
ObjectMatrixImpl<R,C,V>	Matrix that can hold any type of object
RCDoubleMatrix1D	A row-compressed 1D matrix.
SparseDoubleMatrix<R,C>	A sparse matrix that knows about row and column names.
SparseRaggedDoubleMatrix<R,C>	A sparse matrix class where the rows are ragged and compressed.
StringMatrix<R,C>	A NamedMatrix containing String objects.