Package ubic.basecode.ontology.providers

Class GenericOntologyService

java.lang.Object

ubic.basecode.ontology.providers.AbstractDelegatingOntologyService

ubic.basecode.ontology.providers.GenericOntologyService

All Implemented Interfaces:

AutoCloseable, OntologyService

public class GenericOntologyService
extends AbstractDelegatingOntologyService

A way to create ad-hoc in-memory ontology services.

Author:

Paul

Nested Class Summary

Nested classes/interfaces inherited from interface ubic.basecode.ontology.providers.OntologyService

OntologyService.InferenceMode, OntologyService.LanguageLevel

Constructor Summary

Constructors

Constructor	Description
GenericOntologyService(String name, String url)
GenericOntologyService(String name, String url, String cacheName)

Method Summary

Methods inherited from class ubic.basecode.ontology.providers.AbstractDelegatingOntologyService

cancelInitializationThread, close, findIndividuals, findResources, findTerm, findUsingAlternativeId, getAdditionalPropertyUris, getAllURIs, getChildren, getDescription, getExcludedWordsFromStemming, getInferenceMode, getLanguageLevel, getName, getParents, getProcessImports, getResource, getTerm, getTermIndividuals, index, initialize, initialize, isEnabled, isInitializationThreadAlive, isInitializationThreadCancelled, isOntologyLoaded, isSearchEnabled, loadTermsInNameSpace, setAdditionalPropertyUris, setExcludedWordsFromStemming, setInferenceMode, setLanguageLevel, setProcessImports, setSearchEnabled, startInitializationThread, toString, waitForInitializationThread

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface ubic.basecode.ontology.providers.OntologyService

findIndividuals, findResources, findTerm, getChildren, getParents

Constructor Detail

GenericOntologyService

public GenericOntologyService(String name,
                              String url,
                              @Nullable
                              String cacheName)

GenericOntologyService

public GenericOntologyService(String name,
                              String url)