Uses of Class
ubic.gemma.cli.options.ExpressionDataFileOptionValue

Packages that use ExpressionDataFileOptionValue

Package	Description
ubic.gemma.apps	This package contains built-in Gemma CLI applications.
ubic.gemma.cli.options	This package contains reusable command line options.

Uses of ExpressionDataFileOptionValue in ubic.gemma.apps

Methods in ubic.gemma.apps that return ExpressionDataFileOptionValue

Modifier and Type	Method	Description
protected ExpressionDataFileOptionValue	ExpressionExperimentManipulatingCLI.getExpressionDataFileOptionValue(org.apache.commons.cli.CommandLine commandLine, boolean allowStandardLocation)

Uses of ExpressionDataFileOptionValue in ubic.gemma.cli.options

Subclasses of ExpressionDataFileOptionValue in ubic.gemma.cli.options

Modifier and Type	Class	Description
class	SingleCellExpressionDataFileOptionValue	Rows are probes/genes, columns are samples/assays.

Methods in ubic.gemma.cli.options that return ExpressionDataFileOptionValue

Modifier and Type	Method	Description
static ExpressionDataFileOptionValue	DataFileOptionsUtils.getExpressionDataFileOptionValue(org.apache.commons.cli.CommandLine commandLine, boolean allowStandardLocation, String forceOption, boolean force)

Constructors in ubic.gemma.cli.options with parameters of type ExpressionDataFileOptionValue

Modifier	Constructor	Description
	SingleCellExpressionDataFileOptionValue(ExpressionDataFileOptionValue dfov, boolean useEnsemblIds)