Uses of Class
ubic.gemma.model.expression.bioAssayData.ExperimentExpressionLevelsValueObject

Packages that use ExperimentExpressionLevelsValueObject

Package	Description
ubic.gemma.persistence.service.expression.bioAssayData

Uses of ExperimentExpressionLevelsValueObject in ubic.gemma.persistence.service.expression.bioAssayData

Methods in ubic.gemma.persistence.service.expression.bioAssayData that return types with arguments of type ExperimentExpressionLevelsValueObject

Modifier and Type	Method	Description
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorService.getExpressionLevels(Collection<ExpressionExperiment> ees, Collection<Gene> genes, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorServiceImpl.getExpressionLevels(Collection<ExpressionExperiment> ees, Collection<Gene> genes, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorService.getExpressionLevelsByIds(Collection<Long> datasetIds, Collection<Gene> genes, boolean keepNonSpecific, String consolidationMode)	Retrieve expression levels by dataset IDs.
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorServiceImpl.getExpressionLevelsByIds(Collection<Long> eeIds, Collection<Gene> genes, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorService.getExpressionLevelsDiffEx(Collection<ExpressionExperiment> ees, Long diffExResultSetId, double threshold, int max, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorServiceImpl.getExpressionLevelsDiffEx(Collection<ExpressionExperiment> ees, Long diffExResultSetId, double threshold, int max, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorService.getExpressionLevelsPca(Collection<ExpressionExperiment> ees, int threshold, int component, boolean keepGeneNonSpecific, String consolidateMode)
List<ExperimentExpressionLevelsValueObject>	ProcessedExpressionDataVectorServiceImpl.getExpressionLevelsPca(Collection<ExpressionExperiment> ees, int limit, int component, boolean keepGeneNonSpecific, String consolidateMode)