Uses of Class
ubic.gemma.persistence.service.expression.experiment.ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm

Packages that use ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm

Package	Description
ubic.gemma.persistence.service.expression.experiment

Uses of ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm in ubic.gemma.persistence.service.expression.experiment

Methods in ubic.gemma.persistence.service.expression.experiment that return types with arguments of type ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm

Modifier and Type	Method	Description
List<ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm>	ExpressionExperimentReadService.getAnnotationsUsageFrequency(Filters filters, Set<Long> extraIds, String category, Collection<String> excludedCategoryUris, Collection<String> excludedTermUris, int minFrequency, Collection<String> retainedTermUris, int maxResults, boolean includePredicates, boolean includeObjects, long timeout, TimeUnit timeUnit)
List<ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm>	ExpressionExperimentReadServiceImpl.getAnnotationsUsageFrequency(Filters filters, Set<Long> extraIds, String category, Collection<String> excludedCategoryUris, Collection<String> excludedTermUris, int minFrequency, Collection<String> retainedTermUris, int maxResults, boolean includePredicates, boolean includeObjects, long timeout, TimeUnit timeUnit)	If the term cannot be resolved via OntologyService.getTerm(String, long, TimeUnit), an attempt is done to resolve its category and assign it as its parent.
List<ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm>	ExpressionExperimentService.getAnnotationsUsageFrequency(Filters filters, Set<Long> extraIds, String category, Collection<String> excludedCategoryUris, Collection<String> excludedTermUris, int minFrequency, Collection<String> retainedTermUris, int maxResults, boolean includePredicates, boolean includeObjects, long timeout, TimeUnit timeUnit)	Obtain annotation usage frequency for datasets matching the given filters.
List<ExpressionExperimentService.CharacteristicWithUsageStatisticsAndOntologyTerm>	ExpressionExperimentServiceImpl.getAnnotationsUsageFrequency(Filters filters, Set<Long> extraIds, String category, Collection<String> excludedCategoryUris, Collection<String> excludedTermUris, int minFrequency, Collection<String> retainedTermUris, int maxResults, boolean includePredicates, boolean includeObjects, long timeout, TimeUnit timeUnit)