Uses of Interface
ubic.gemma.persistence.service.expression.experiment.ExpressionExperimentService

Packages that use ExpressionExperimentService

Package	Description
ubic.gemma.core.config	This package contains classes that are used to manage Gemma's Spring context.
ubic.gemma.core.loader.expression.cellxgene	This package contains classes for loading expression data from CELLxGENE.
ubic.gemma.core.scheduler
ubic.gemma.core.tasks.maintenance
ubic.gemma.persistence.service.common.description
ubic.gemma.persistence.service.expression.experiment
ubic.gemma.persistence.service.genome.taxon
ubic.gemma.persistence.util

Uses of ExpressionExperimentService in ubic.gemma.core.config

Methods in ubic.gemma.core.config with parameters of type ExpressionExperimentService

Modifier and Type	Method	Description
org.springframework.scheduling.quartz.JobDetailFactoryBean	SchedulerConfig.batchInfoJobDetail(ExpressionExperimentService expressionExperimentService, ExpressionExperimentReportService expressionExperimentReportService, AuditEventService auditEventService, org.springframework.security.core.context.SecurityContext securityContext)

Uses of ExpressionExperimentService in ubic.gemma.core.loader.expression.cellxgene

Constructors in ubic.gemma.core.loader.expression.cellxgene with parameters of type ExpressionExperimentService

Modifier	Constructor	Description
	CellXGeneDataLoaderServiceImpl(Persister persister, ArrayDesignService arrayDesignService, ExpressionExperimentService expressionExperimentService, SingleCellExpressionExperimentService singleCellExpressionExperimentService, ExternalDatabaseService externalDatabaseService, DatabaseEntryService databaseEntryService, TaxonReadService taxonReadService, SingleCellDataTransformationFactory singleCellDataTransformationFactory, org.springframework.transaction.PlatformTransactionManager transactionManager, Path cellXGeneDownloadPath, Path cellXGeneTransposedPath, String ncbiApiKey)

Uses of ExpressionExperimentService in ubic.gemma.core.scheduler

Methods in ubic.gemma.core.scheduler with parameters of type ExpressionExperimentService

Modifier and Type	Method	Description
void	BatchInfoRepopulationJob.setExpressionExperimentService(ExpressionExperimentService expressionExperimentService)

Uses of ExpressionExperimentService in ubic.gemma.core.tasks.maintenance

Constructors in ubic.gemma.core.tasks.maintenance with parameters of type ExpressionExperimentService

Modifier	Constructor	Description
	CharacteristicUpdateTaskImpl(BioMaterialService bioMaterialService, CharacteristicService characteristicService, ExpressionExperimentService expressionExperimentService, FactorValueService factorValueService, SecurityService securityService)

Uses of ExpressionExperimentService in ubic.gemma.persistence.service.common.description

Constructors in ubic.gemma.persistence.service.common.description with parameters of type ExpressionExperimentService

Modifier	Constructor	Description
	BibliographicReferenceReadServiceImpl(BibliographicReferenceDao bibliographicReferenceDao, SearchService searchService, ExpressionExperimentService expressionExperimentService)

Uses of ExpressionExperimentService in ubic.gemma.persistence.service.expression.experiment

Classes in ubic.gemma.persistence.service.expression.experiment that implement ExpressionExperimentService

Modifier and Type	Class	Description
class	ExpressionExperimentServiceImpl

Constructors in ubic.gemma.persistence.service.expression.experiment with parameters of type ExpressionExperimentService

Modifier	Constructor	Description
	ExpressionExperimentSearchServiceImpl(ExpressionExperimentSetService expressionExperimentSetService, DifferentialExpressionAnalysisService differentialExpressionAnalysisService, SecurityService securityService, SearchService searchService, TaxonService taxonService, ExpressionExperimentService expressionExperimentService)
	ExpressionExperimentSetValueObjectHelperImpl(ExpressionExperimentSetService expressionExperimentSetService, ExpressionExperimentService expressionExperimentService, TaxonService taxonService, SecurityService securityService)
	GeeqServiceImpl(GeeqDao geeqDao, ExpressionExperimentService expressionExperimentService, ExpressionExperimentBatchInformationService expressionExperimentBatchInformationService, OutlierDetectionService outlierDetectionService, GeeqAuditService geeqAuditService, SampleCoexpressionAnalysisService sampleCoexpressionAnalysisService)
	PreboardedExperimentServiceImpl(SessionFactory sessionFactory, AnnotationSetService annotationSetService, ExpressionExperimentService expressionExperimentService, PreboardedAuditService preboardedAuditService)

Uses of ExpressionExperimentService in ubic.gemma.persistence.service.genome.taxon

Constructors in ubic.gemma.persistence.service.genome.taxon with parameters of type ExpressionExperimentService

Modifier	Constructor	Description
	TaxonReadServiceImpl(TaxonDao taxonDao, ExpressionExperimentService expressionExperimentService, ArrayDesignService arrayDesignService)

Uses of ExpressionExperimentService in ubic.gemma.persistence.util

Methods in ubic.gemma.persistence.util with parameters of type ExpressionExperimentService

Modifier and Type	Method	Description
org.springframework.core.convert.ConversionService	ValueObjectConfig.valueObjectConversionService(ArrayDesignService arrayDesignService, BibliographicReferenceService bibliographicReferenceService, BioSequenceService bioSequenceService, CompositeSequenceService compositeSequenceService, ExpressionExperimentService expressionExperimentService, ExpressionExperimentSetService experimentSetService, GeneService geneService, GeneSetService geneSetService, BlacklistedEntityService blacklistedEntityService)