Package ubic.gemma.web.controller.expression.experiment

Class SingleCellExpressionDataModel

java.lang.Object

ubic.gemma.web.controller.expression.experiment.SingleCellExpressionDataModel

public final class SingleCellExpressionDataModel
extends Object

Constructor Summary

Constructors

Constructor

Description

SingleCellExpressionDataModel(ubic.gemma.model.expression.experiment.ExpressionExperiment expressionExperiment, Collection<ubic.gemma.model.expression.bioAssayData.CellTypeAssignment> cellTypeAssignments, Collection<ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics> cellLevelCharacteristics, ubic.gemma.model.common.quantitationtype.QuantitationType quantitationType, ubic.gemma.model.expression.designElement.CompositeSequence designElement, ubic.gemma.model.genome.Gene gene, Long[] assayIds, ubic.gemma.model.expression.bioAssayData.CellTypeAssignment cellTypeAssignment, ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics cellLevelCharacteristics1, ubic.gemma.model.common.description.Characteristic focusedCharacteristic, String keywords, String font)

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
Long[]	getAssayIds()
Collection<ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics>	getCellLevelCharacteristics()
ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics	getCellLevelCharacteristics1()
ubic.gemma.model.expression.bioAssayData.CellTypeAssignment	getCellTypeAssignment()
Collection<ubic.gemma.model.expression.bioAssayData.CellTypeAssignment>	getCellTypeAssignments()
ubic.gemma.model.expression.designElement.CompositeSequence	getDesignElement()
ubic.gemma.model.expression.experiment.ExpressionExperiment	getExpressionExperiment()
ubic.gemma.model.common.description.Characteristic	getFocusedCharacteristic()
String	getFont()
ubic.gemma.model.genome.Gene	getGene()
String	getKeywords()
ubic.gemma.model.common.quantitationtype.QuantitationType	getQuantitationType()
int	hashCode()
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

SingleCellExpressionDataModel

public SingleCellExpressionDataModel(ubic.gemma.model.expression.experiment.ExpressionExperiment expressionExperiment,
 Collection<ubic.gemma.model.expression.bioAssayData.CellTypeAssignment> cellTypeAssignments,
 Collection<ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics> cellLevelCharacteristics,
 ubic.gemma.model.common.quantitationtype.QuantitationType quantitationType,
 ubic.gemma.model.expression.designElement.CompositeSequence designElement,
 @Nullable
 ubic.gemma.model.genome.Gene gene,
 @Nullable
 Long[] assayIds,
 @Nullable
 ubic.gemma.model.expression.bioAssayData.CellTypeAssignment cellTypeAssignment,
 @Nullable
 ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics cellLevelCharacteristics1,
 @Nullable
 ubic.gemma.model.common.description.Characteristic focusedCharacteristic,
 String keywords,
 @Nullable
 String font)

Method Details

getExpressionExperiment

public ubic.gemma.model.expression.experiment.ExpressionExperiment getExpressionExperiment()

getCellTypeAssignments

public Collection<ubic.gemma.model.expression.bioAssayData.CellTypeAssignment> getCellTypeAssignments()

getCellLevelCharacteristics

public Collection<ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics> getCellLevelCharacteristics()

getQuantitationType

public ubic.gemma.model.common.quantitationtype.QuantitationType getQuantitationType()

getDesignElement

public ubic.gemma.model.expression.designElement.CompositeSequence getDesignElement()

getGene

@Nullable
public ubic.gemma.model.genome.Gene getGene()

getAssayIds

@Nullable
public Long[] getAssayIds()

getCellTypeAssignment

@Nullable
public ubic.gemma.model.expression.bioAssayData.CellTypeAssignment getCellTypeAssignment()

getCellLevelCharacteristics1

@Nullable
public ubic.gemma.model.expression.bioAssayData.CellLevelCharacteristics getCellLevelCharacteristics1()

getFocusedCharacteristic

@Nullable
public ubic.gemma.model.common.description.Characteristic getFocusedCharacteristic()

getKeywords

public String getKeywords()

getFont

@Nullable
public String getFont()

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object