List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Lee, Jiyeon et al. (2023) ANKS1A regulates LDL receptor-related protein 1 (LRP1)-mediated cerebrovascular clearance in brain endothelial cells.; Nat Commun, 14: 8463 |
|
GSE220105 |
| Lee, Jiyeon et al. (2023) Microglial REV-ERBα regulates inflammation and lipid droplet formation to drive tauopathy in male mice.; Nat Commun, 14: 5197 |
|
GSE236875 |
| Lee, Jiyeon et al. (2025) REV-ERBα regulates brain NAD+levels and tauopathy via an NFIL3-CD38 axis.; Nat Aging, 5: 2070-2085 |
|
GSE255975 |
| Lee, John J et al. (2016) Control of inflammation by stromal Hedgehog pathway activation restrains colitis.; Proc Natl Acad Sci U S A, 113: E7545-E7553 |
|
GSE88994 |
| Lee, John J Y et al. (2025) ZIC1 is a context-dependent medulloblastoma driver in the rhombic lip.; Nat Genet, [no vol.]: [no pages] |
|
GSE217571.1 GSE217571.2 |
| Lee, Jonathan D et al. (2023) Cognition-associated long noncoding RNAs are dysregulated upon severe COVID-19.; Front Immunol, 15: 1290523 |
|
GSE188847 |
| Lee, Jong-Min et al. (2007) Unbiased gene expression analysis implicates the huntingtin polyglutamine tract in extra-mitochondrial energy metabolism.; PLoS Genet, 3: e135 |
|
GSE3583 |
| Lee, Jong-Min et al. (2013) Dominant effects of the Huntington's disease HTT CAG repeat length are captured in gene-expression data sets by a continuous analysis mathematical modeling strategy.; Hum Mol Genet, 22: 3227-38 |
|
GSE34721 |
| Lee, Jong-Min et al. (2023) Ahnak is required to balance calcium ion homeostasis and smooth muscle development in the urinary system.; Cell Biosci, 13: 108 |
|
GSE218925 |
| Lee, Jongbo et al. (2020) LSM12-EPAC1 defines a neuroprotective pathway that sustains the nucleocytoplasmic RAN gradient.; PLoS Biol, 18: e3001002 |
|
GSE160159 |
| Lee, Jongeun et al. (2025) ETV5 reduces androgen receptor expression and induces neural stem-like properties during neuroendocrine prostate cancer development.; Proc Natl Acad Sci U S A, 122: e2420313122 |
|
GSE271776 |
| Lee, Jonghyeob et al. (2017) Reconstituting development of pancreatic intraepithelial neoplasia from primary human pancreas duct cells.; Nat Commun, 8: 14686 |
|
GSE88997 |
| Lee, Joo Han et al. (2020) Dopaminergic Regulation of Nucleus Accumbens Cholinergic Interneurons Demarcates Susceptibility to Cocaine Addiction.; Biol Psychiatry, 88: 746-757 |
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GSE130376 |
| Lee, Joonyong et al. (2021) Activation of Proneuronal Transcription Factor Ascl1 in Maternal Liver Ensures a Healthy Pregnancy.; Cell Mol Gastroenterol Hepatol, 13: 35-55 |
|
GSE186620 |
| Lee, Ju Youn et al. (2018) Neuronal SphK1 acetylates COX2 and contributes to pathogenesis in a model of Alzheimer's Disease.; Nat Commun, 9: 1479 |
|
GSE146133 |
| Lee, Jun et al. (2012) Scaling proprioceptor gene transcription by retrograde NT3 signaling.; PLoS One, 7: e45551 |
|
GSE38074 |
| Lee, June-Yong et al. (2020) Serum Amyloid A Proteins Induce Pathogenic Th17 Cells and Promote Inflammatory Disease.; Cell, 180: 79-91.e16 |
|
GSE133180 |
| Lee, Junekyoung et al. (2024) Characterization of a new selective glucocorticoid receptor modulator with anorexigenic activity.; Sci Rep, 14: 7844 |
|
GSE260739 |
| Lee, Kang-Han et al. (2024) Complimentary vertebrateWacmodels exhibit phenotypes relevant to DeSanto-Shinawi Syndrome.; bioRxiv, [no vol.]: [no pages] |
|
GSE264597 |
| Lee, Katie C Y et al. (2024) PKM2 regulates metabolic flux and oxidative stress in the murine heart.; Physiol Rep, 12: e70040 |
|
GSE243668 |
| Lee, Kun Ho et al. (2022) Infection of the murine placenta by Listeria monocytogenes induces sex-specific responses in the fetal brain.; Pediatr Res, [no vol.]: [no pages] |
|
GSE213619 |
| Lee, Kwan Young et al. (2015) N-methyl-D-aspartate receptors mediate activity-dependent down-regulation of potassium channel genes during the expression of homeostatic intrinsic plasticity.; Mol Brain, 8: 4 |
|
GSE104052 |
| Lee, Kyubin et al. (2023) Dimethyl alpha-ketoglutarate inhibits proliferation in diffuse intrinsic pontine glioma by reprogramming epigenetic and transcriptional networks.; Biochem Biophys Res Commun, 677: 6-12 |
|
GSE237008 |
| Lee, Mary P et al. (2011) Twist1 directly regulates genes that promote cell proliferation and migration in developing heart valves.; PLoS One, 6: e29758 |
|
GSE30953 |
| Lee, Michael J et al. (2012) Sequential application of anticancer drugs enhances cell death by rewiring apoptotic signaling networks.; Cell, 149: 780-94 |
|
GSE30516 |
| Lee, Michelle J et al. (2012) Hedgehog pathway inhibitor saridegib (IPI-926) increases lifespan in a mouse medulloblastoma model.; Proc Natl Acad Sci U S A, 109: 7859-64 |
|
GSE37417 |
| Lee, Min Joung et al. (2022) A transcriptomic analysis of cerebral microvessels reveals the involvement of Notch1 signaling in endothelial mitochondrial-dysfunction-dependent BBB disruption.; Fluids Barriers CNS, 19: 64 |
|
GSE207106 |
| Lee, Min-Sik et al. (2023) Ornithine aminotransferase supports polyamine synthesis in pancreatic cancer.; Nature, 616: 339-347 |
|
GSE193411 |
| Lee, Minhyung et al. (2019) Direct Reprogramming to Human Induced Neuronal Progenitors from Fibroblasts of Familial and Sporadic Parkinson's Disease Patients.; Int J Stem Cells, 12: 474-483 |
|
GSE157392 |
| Lee, Minnkyong et al. (2015) GNL3 and SKA3 are novel prostate cancer metastasis susceptibility genes.; Clin Exp Metastasis, 32: 769-82 |
|
GSE61864 |
| Lee, Misu et al. (2013) Transcriptome analysis of MENX-associated rat pituitary adenomas identifies novel molecular mechanisms involved in the pathogenesis of human pituitary gonadotroph adenomas.; Acta Neuropathol, 126: 137-50 |
|
GSE23207 |
| Lee, Myeong Sup et al. (2004) Gene expression profiles during human CD4+ T cell differentiation.; Int Immunol, 16: 1109-24 |
|
GSE1460 |
| Lee, Peiyee et al. (2013) SMRT compounds abrogate cellular phenotypes of ataxia telangiectasia in neural derivatives of patient-specific hiPSCs.; Nat Commun, 4: 1824 |
|
GSE45030 |
| Lee, Philip R et al. (2017) Gene networks activated by specific patterns of action potentials in dorsal root ganglia neurons.; Sci Rep, 7: 43765 |
|
GSE84872 |
| Lee, Quinn et al. (2023) End binding-3 inhibitor activates regenerative program in age-related macular degeneration.; Cell Rep Med, 4: 101223 |
|
GSE228269 |
| Lee, Rebecca A et al. (2023) Transcriptional coactivation by EHMT2 restricts glucocorticoid-induced insulin resistance in a study with male mice.; Nat Commun, 14: 3143 |
|
GSE179180 |
| Lee, Rumi et al. (2022) Synthetic Essentiality of Tryptophan 2,3-Dioxygenase 2 in APC-Mutated Colorectal Cancer.; Cancer Discov, 12: 1702-1717 |
|
GSE201415 |
| Lee, Sang Bae et al. (2022) Regulated interaction of ID2 with the anaphase-promoting complex links progression through mitosis with reactivation of cell-type-specific transcription.; Nat Commun, 13: 2089 |
|
GSE181639 |
| Lee, Sangderk et al. (2023) APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge.; Cell Rep, 42: 112196 |
|
GSE212343 |
| Lee, Sangderk et al. (2023) APOE4drives transcriptional heterogeneity and maladaptive immunometabolic responses of astrocytes.; bioRxiv, [no vol.]: [no pages] |
|
GSE215446 |
| Lee, Se-In et al. (2025) Astrocyte priming enhances microglial Aβ clearance and is compromised by APOE4.; Nat Commun, 16: 7551 |
|
GSE274868 GSE274869 |
| Lee, Seo-Young et al. (2019) K120R mutation inactivates p53 by creating an aberrant splice site leading to nonsense-mediated mRNA decay.; Oncogene, 38: 1597-1610 |
|
GSE119891 |
| Lee, Seong Eun et al. (2024) Unraveling the role of the mitochondrial one-carbon pathway in undifferentiated thyroid cancer by multi-omics analyses.; Nat Commun, 15: 1163 |
|
GSE213647 |
| Lee, Seong Won et al. (2018) MicroRNAs Overcome Cell Fate Barrier by Reducing EZH2-Controlled REST Stability during Neuronal Conversion of Human Adult Fibroblasts.; Dev Cell, 46: 73-84.e7 |
|
GSE114541 |
| Lee, Seong Won et al. (2023) Longitudinal modeling of human neuronal aging reveals the contribution of the RCAN1-TFEB pathway to Huntington's disease neurodegeneration.; Nat Aging, [no vol.]: [no pages] |
|
GSE241430 |
| Lee, Seonmi et al. (2023) Mastication stimuli regulate the heartbeat rate through rhythmic regulation by the hypothalamic-autonomic system; molecular and telemetric studies in weaning-stage rats.; Front Neurosci, 17: 1260655 |
|
GSE236446 |
| Lee, Seul Ji et al. (2013) Distinguishing between genotoxic and non-genotoxic hepatocarcinogens by gene expression profiling and bioinformatic pathway analysis.; Sci Rep, 3: 2783 |
|
GSE31307 |
| Lee, Seung Bum et al. (2012) Contribution of hepatic lineage stage-specific donor memory to the differential potential of induced mouse pluripotent stem cells.; Stem Cells, 30: 997-1007 |
|
GSE33110 |
| Lee, Seung Hyun et al. (2022) Single-cell transcriptomics reveal cellular diversity of aortic valve and the immunomodulation by PPARγ during hyperlipidemia.; Nat Commun, 13: 5461 |
|
GSE206927 |
| Lee, Seung-Eun et al. (2020) Human iNSC-derived brain organoid model of lysosomal storage disorder in Niemann-Pick disease type C.; Cell Death Dis, 11: 1059 |
|
GSE157676 |
| Lee, Seung-Hye et al. (2021) TREM2-independent oligodendrocyte, astrocyte, and T cell responses to tau and amyloid pathology in mouse models of Alzheimer disease.; Cell Rep, 37: 110158 |
|
GSE181786 |
| Lee, Seung-Hyun et al. (2020) Haploinsufficiency of Cyfip2 Causes Lithium-Responsive Prefrontal Dysfunction.; Ann Neurol, 88: 526-543 |
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GSE129120 GSE129052 |
| Lee, Seung-Tae et al. (2012) A global DNA methylation and gene expression analysis of early human B-cell development reveals a demethylation signature and transcription factor network.; Nucleic Acids Res, 40: 11339-51 |
|
GSE45460 |
| Lee, Seungjoon et al. (2021) Gene Dosage- and Age-Dependent Differential Transcriptomic Changes in the Prefrontal Cortex ofShank2-Mutant Mice.; Front Mol Neurosci, 14: 683196 |
|
GSE168211 |
| Lee, Shuet Theng et al. (2011) Context-specific regulation of NF-?B target gene expression by EZH2 in breast cancers.; Mol Cell, 43: 798-810 |
|
GSE30670 |
| Lee, Shuet Theng et al. (2013) Protein tyrosine phosphatase UBASH3B is overexpressed in triple-negative breast cancer and promotes invasion and metastasis.; Proc Natl Acad Sci U S A, 110: 11121-6 |
|
GSE36693 |
| Lee, Sohyon et al. (2024) High-throughput identification of repurposable neuroactive drugs with potent anti-glioblastoma activity.; Nat Med, 30: 3196-3208 |
|
GSE214968 GSE214966 |
| Lee, Song Eun et al. (2014) High Runx1 levels promote a reversible, more-differentiated cell state in hair-follicle stem cells during quiescence.; Cell Rep, 6: 499-513 |
|
GSE53077 |
| Lee, Soo Yeon et al. (2023) Age-differential sexual dimorphisms in CHD8-S62X-mutant mouse synapses and transcriptomes.; Front Mol Neurosci, 16: 1111388 |
|
GSE167053 |
| Lee, Soo Yeon et al. (2023) The deubiquitinase UCHL3 mediates p300-dependent chemokine signaling in alveolar type II cells to promote pulmonary fibrosis.; Exp Mol Med, 55: 1795-1805 |
|
GSE190157 |
| Lee, Soon Kyu et al. (2020) Combination Treatment With Metformin and Tacrolimus Improves Systemic Immune Cellular Homeostasis by Modulating Treg and Th17 Imbalance.; Front Immunol, 11: 581728 |
|
GSE161187 |
| Lee, Stephen D et al. (2021) Integrative multi-omic analysis reveals neurodevelopmental gene dysregulation in CIC-knockout and IDH1-mutant cells.; J Pathol, [no vol.]: [no pages] |
|
GSE189859 |
| Lee, Su-In et al. (2018) A machine learning approach to integrate big data for precision medicine in acute myeloid leukemia.; Nat Commun, 9: 42 |
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GSE107465 GSE108003 |
| Lee, Suhjin et al. (2024) Isogenic iPSC-derivedCTBP1mutant neuronal cells exhibit neurodevelopmental defects.; Front Neurosci, 19: 1695464 |
|
GSE306099 |
| Lee, Suki M Y et al. (2009) Systems-level comparison of host-responses elicited by avian H5N1 and seasonal H1N1 influenza viruses in primary human macrophages.; PLoS One, 4: e8072 |
|
GSE18816 |
| Lee, Sun Hee et al. (2021) RUNX3 methylation drives hypoxia-induced cell proliferation and antiapoptosis in early tumorigenesis.; Cell Death Differ, 28: 1251-1269 |
|
GSE81693 |
| Lee, Sun Young et al. (2024) Differential but complementary roles of HIF-1α and HIF-2α in the regulation of bone homeostasis.; Commun Biol, 7: 892 |
|
GSE271730 |
| Lee, Sunjae et al. (2016) Integrated Network Analysis Reveals an Association between Plasma Mannose Levels and Insulin Resistance.; Cell Metab, 24: 172-84 |
|
GSE83322 |
| Lee, Sunju et al. (2009) Prox1 physically and functionally interacts with COUP-TFII to specify lymphatic endothelial cell fate.; Blood, 113: 1856-9 |
|
GSE12846 |
| Lee, Vivian K et al. (2025) 3D Brain Vascular Niche Model Captures Glioblastoma Infiltration, Dormancy, and Gene Signatures.; Adv Sci (Weinh), 12: e00689 |
|
GSE270481 |
| Lee, Won Hee et al. (2019) Modeling Cardiovascular Risks of E-Cigarettes With Human-Induced Pluripotent Stem Cell-Derived Endothelial Cells.; J Am Coll Cardiol, 73: 2722-2737 |
|
GSE125217 |
| Lee, Won-Seok et al. (2021) Dual targeting of brain region-specific kinases potentiates neurological rescue in Spinocerebellar ataxia type 1.; EMBO J, 40: e106106 |
|
GSE151276 |
| Lee, Wonyoung et al. (2025) Cyclin-dependent kinase inhibitor p18 regulates lineage transitions of excitatory neurons, astrocytes, and interneurons in the mouse cortex.; EMBO J, 44: 382-412 |
|
GSE265784 |
| Lee, Y-H et al. (2011) Molecular targeting of CSN5 in human hepatocellular carcinoma: a mechanism of therapeutic response.; Oncogene, 30: 4175-84 |
|
GSE26485 |
| Lee, Yeon J et al. (2024) A mutation in the low-complexity domain of splicing factor hnRNPA1 linked to amyotrophic lateral sclerosis disrupts distinct neuronal RNA splicing networks.; Genes Dev, 38: 11-30 |
|
GSE252683 |
| Lee, Yeunkum et al. (2017) Striatal Transcriptome and Interactome Analysis ofShank3-overexpressing Mice Reveals the Connectivity between Shank3 and mTORC1 Signaling.; Front Mol Neurosci, 10: 201 |
|
GSE97544 |
| Lee, Yeunkum et al. (2019) Transcriptome analyses suggest minimal effects of Shank3 dosage on directional gene expression changes in the mouse striatum.; Anim Cells Syst (Seoul), 23: 270-274 |
|
GSE124946 |
| Lee, Yi Fang et al. (2012) JMJD6 is a driver of cellular proliferation and motility and a marker of poor prognosis in breast cancer.; Breast Cancer Res, 14: R85 |
|
GSE31782 |
| Lee, Yohan et al. (2010) Genomic landscape of meningiomas.; Brain Pathol, 20: 751-62 |
|
GSE16581 |
| Lee, Yool et al. (2024) Integrated Transcriptome Profiling and Pan-Cancer Analyses Reveal Oncogenic Networks and Tumor-Immune Modulatory Roles for FABP7 in Brain Cancers.; Int J Mol Sci, 25: [no pages] |
|
GSE271985 |
| Lee, Yool et al. (2025) Sleep loss-induced oncogenic pathways are mediated via the neuron-specific interleukin-1 receptor accessory protein (AcPb).; Brain Behav Immun, 123: 411-421 |
|
GSE263872 |
| Lee, Youjin et al. (2012) Induction and molecular signature of pathogenic TH17 cells.; Nat Immunol, 13: 991-9 |
|
GSE39820 |
| Lee, Young S et al. (2016) Repeated exposure to neurotoxic levels of chlorpyrifos alters hippocampal expression of neurotrophins and neuropeptides.; Toxicology, 340: 53-62 |
|
GSE74676 GSE74726 |
| Lee, Yu-Hsiang et al. (2012) Salivary transcriptomic biomarkers for detection of ovarian cancer: for serous papillary adenocarcinoma.; J Mol Med (Berl), 90: 427-34 |
|
GSE29220 |
| Lee, Yu-Ru et al. (2019) Reactivation of PTEN tumor suppressor for cancer treatment through inhibition of a MYC-WWP1 inhibitory pathway.; Science, 364: [no pages] |
|
GSE126789 |
| Lee, Yun-Han et al. (2010) Definition of ubiquitination modulator COP1 as a novel therapeutic target in human hepatocellular carcinoma.; Cancer Res, 70: 8264-9 |
|
GSE21955 |
| Lee, Yunjeong et al. (2023) Transcriptional control of motor pool formation and motor circuit connectivity by the LIM-HD protein Isl2.; Elife, 12: [no pages] |
|
GSE217297 |
| Lee, Yunjin et al. (2025) Brain-wide mapping of immune receptors uncovers a neuromodulatory role of IL-17E and the receptor IL-17RB.; Cell, 188: 2203-2217.e17 |
|
GSE286801 |
| Lee-Thacker, Somang et al. (2020) Core Binding Factors are essential for ovulation, luteinization, and female fertility in mice.; Sci Rep, 10: 9921 |
|
GSE140922 |
| Leeb, Martin et al. (2010) Polycomb complexes act redundantly to repress genomic repeats and genes.; Genes Dev, 24: 265-76 |
|
GSE19076 |
| Lees, Andrea et al. (2020) The pseudo-caspase FLIP(L) regulates cell fate following p53 activation.; Proc Natl Acad Sci U S A, 117: 17808-17819 |
|
GSE113682 |
| Lefebure, Marcus et al. (2017) Genomic characterisation of E?-Myc mouse lymphomas identifies Bcor as a Myc co-operative tumour-suppressor gene.; Nat Commun, 8: 14581 |
|
GSE60342 |
| Lefevre, Gaelle M et al. (2010) Altering a histone H3K4 methylation pathway in glomerular podocytes promotes a chronic disease phenotype.; PLoS Genet, 6: e1001142 |
|
GSE17709 |
| Lefferts, Adam R et al. (2021) Circulating mature granzyme B+ T cells distinguish Crohn's disease-associated axial spondyloarthritis from axial spondyloarthritis and Crohn's disease.; Arthritis Res Ther, 23: 147 |
|
GSE163314.1 |