List of all 21,932 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Li, Jiang et al. (2004) Genetic dissection of systemic autoimmune disease in Nrf2-deficient mice.; Physiol Genomics, 18: 261-72 |
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GSE867 |
| Li, Jianlong et al. (2025) Rescue of non-healing, degenerative salivary glands by cholinergic-calcium signaling.; bioRxiv, [no vol.]: [no pages] |
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GSE272766 |
| Li, Jianming et al. (2024) Human cytomegalovirus infection impairs neural differentiation via repressing sterol regulatory element binding protein 2-mediated cholesterol biosynthesis.; Cell Mol Life Sci, 81: 289 |
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GSE182788 |
| Li, Jing et al. (2021) Tumour-derived substrate-adherent cells promote neuroblastoma survival through secreted trophic factors.; Mol Oncol, 15: 2011-2025 |
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GSE139235 |
| Li, Jing et al. (2022) KIR+CD8+T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19.; Science, 376: eabi9591 |
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GSE168527 |
| Li, Jing-Ru et al. (2016) Asymmetric Regulation of Peripheral Genes by Two Transcriptional Regulatory Networks.; PLoS One, 11: e0160459 |
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GSE80676 |
| Li, Jingjing et al. (2014) Integrated systems analysis reveals a molecular network underlying autism spectrum disorders.; Mol Syst Biol, 10: 774 |
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GSE62098 |
| Li, Jingjun et al. (2016) BET bromodomain inhibition promotes neurogenesis while inhibiting gliogenesis in neural progenitor cells.; Stem Cell Res, 17: 212-221 |
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GSE77988 |
| Li, Jingzhen et al. (2025) Intermittent fasting attenuates glial hyperactivation and photoreceptor degeneration in a NaIO3-induced mouse model of age-related macular degeneration.; Commun Biol, 8: 1408 |
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GSE271791 |
| Li, Jinying et al. (2021) Human Amniotic Epithelial Stem Cell-Derived Retinal Pigment Epithelium Cells Repair Retinal Degeneration.; Front Cell Dev Biol, 9: 737242 |
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GSE180616 |
| Li, Jiwen et al. (2018) Transcription Factors Sp8 and Sp9 Coordinately Regulate Olfactory Bulb Interneuron Development.; Cereb Cortex, 28: 3278-3294 |
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GSE86396 GSE93061 |
| Li, Jiwen et al. (2019) Astrocyte-to-astrocyte contact and a positive feedback loop of growth factor signaling regulate astrocyte maturation.; Glia, 67: 1571-1597 |
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GSE125610 |
| Li, Joey H et al. (2024) MEF2C regulates NK cell effector functions through control of lipid metabolism.; Nat Immunol, 25: 778-789 |
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GSE245463.2 GSE245463.1 |
| Li, Jun Z et al. (2007) Sample matching by inferred agonal stress in gene expression analyses of the brain.; BMC Genomics, 8: 336 |
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GSE6306 |
| Li, Jun Z et al. (2013) Circadian patterns of gene expression in the human brain and disruption in major depressive disorder.; Proc Natl Acad Sci U S A, [no vol.]: [no pages] |
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GSE45642.2 GSE45642.1 |
| Li, Jun-Liszt et al. (2025) A targeted vector for brain endothelial cell gene delivery and cerebrovascular malformation modelling.; Nat Biomed Eng, [no vol.]: [no pages] |
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GSE247963 |
| Li, Jung-Miao et al. (2020) Regulation effect and mechanism of Sheng-Hua-Tang on female reproductive system: From experimental transcriptomic analysis to clinical applications.; J Ethnopharmacol, 249: 112431 |
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GSE135608 |
| Li, Junhao et al. (2022) Dnmt3aknockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3.; Elife, 11: [no pages] |
|
GSE141587 |
| Li, Junhao et al. (2023) Divergent single cell transcriptome and epigenome alterations in ALS and FTD patients with C9orf72 mutation.; Nat Commun, 14: 5714 |
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GSE219280.2 GSE219280.1 GSE219278 |
| Li, Junjie et al. (2023) SRSF10 regulates proliferation of neural progenitor cells and affects neurogenesis in developing mouse neocortex.; iScience, 26: 107042 |
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GSE225647.1 GSE225647.2 |
| Li, Kai Xin et al. (2024) A synonymous mutation of rs1137070 cause the miceMaoagene transcription and translation to decrease.; Front Mol Neurosci, 17: 1406708 |
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GSE237077 |
| Li, Kai-Chun et al. (2021) Cell-surface SLC nucleoside transporters and purine levels modulate BRD4-dependent chromatin states.; Nat Metab, 3: 651-664 |
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GSE168099 |
| Li, Kaizhen et al. (2023) Endogenous but not sensory-driven activity controls migration, morphogenesis and survival of adult-born juxtaglomerular neurons in the mouse olfactory bulb.; Cell Mol Life Sci, 80: 98 |
|
GSE168349 |
| Li, Kun et al. (2022) BCL6 is regulated by the MAPK/ELK1 axis and promotes KRAS-driven lung cancer.; J Clin Invest, 132: [no pages] |
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GSE189545.1 GSE189545.2 |
| Li, Kuo et al. (2025) CPT2 inhibition enhances selective autophagy and proliferation in colorectal cancer via GPAT4-dependent glycerophospholipid biosynthesis.; Commun Biol, 8: 1480 |
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GSE303954 |
| Li, Lang et al. (2025) Artificial biomarker-based feedback-regulated personalized and precise thrombolysis with lower hemorrhagic risk.; Sci Adv, 11: eadr0377 |
|
GSE255147 |
| Li, Leanne et al. (2018) GKAP Acts as a Genetic Modulator of NMDAR Signaling to Govern Invasive Tumor Growth.; Cancer Cell, 33: 736-751.e5 |
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GSE102598 |
| Li, Li et al. (2007) Faster rates of post-puberty kidney deterioration in males is correlated with elevated oxidative stress in males vs females at early puberty.; BMC Genomics, 8: 221 |
|
GSE3778 |
| Li, Li et al. (2008) Transcriptome-wide characterization of gene expression associated with unruptured intracranial aneurysms.; Eur Neurol, 62: 330-7 |
|
GSE26969 |
| Li, Li et al. (2013) Differential response of regulatory and conventional CD4? lymphocytes to CD3 engagement: clues to a possible mechanism of anti-CD3 action?; J Immunol, 191: 3694-704 |
|
GSE48210 |
| Li, Li et al. (2016) Real-time imaging of Huntingtin aggregates diverting target search and gene transcription.; Elife, 5: [no pages] |
|
GSE84055 |
| Li, Li et al. (2018) GFAP Mutations in Astrocytes Impair Oligodendrocyte Progenitor Proliferation and Myelination in an hiPSC Model of Alexander Disease.; Cell Stem Cell, 23: 239-251.e6 |
|
GSE116327 |
| Li, Li et al. (2025) The de novo synthesis of GABA and its gene regulatory function control hepatocellular carcinoma metastasis.; Dev Cell, 60: 1053-1069.e6 |
|
GSE277311 |
| Li, Liang et al. (2011) Altered hematopoietic cell gene expression precedes development of therapy-related myelodysplasia/acute myeloid leukemia and identifies patients at risk.; Cancer Cell, 20: 591-605 |
|
GSE23025 |
| Li, Liang et al. (2019) The COMPASS Family Protein ASH2L Mediates Corticogenesis via Transcriptional Regulation of Wnt Signaling.; Cell Rep, 28: 698-711.e5 |
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GSE120986 GSE133413 |
| Li, Lihua et al. (2012) Downregulation of microRNAs miR-1, -206 and -29 stabilizes PAX3 and CCND2 expression in rhabdomyosarcoma.; Lab Invest, 92: 571-83 |
|
GSE28511 |
| Li, Likun et al. (2014) Targeting poly(ADP-ribose) polymerase and the c-Myb-regulated DNA damage response pathway in castration-resistant prostate cancer.; Sci Signal, 7: ra47 |
|
GSE49285 GSE49286 |
| Li, Lin et al. (2019) Histone Deacetylase 3 Governs Perinatal Cerebral Development via Neural Stem and Progenitor Cells.; iScience, 20: 148-167 |
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GSE133195 |
| Li, Lin et al. (2021) YY1 interacts with guanine quadruplexes to regulate DNA looping and gene expression.; Nat Chem Biol, 17: 161-168 |
|
GSE142075 |
| Li, Ling et al. (2025) Gut microbial-derived indole-3-propionate improves cognitive function in Alzheimer's disease.; Sci Adv, 11: eadw8410 |
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GSE164461 |
| Li, Lingzhi et al. (2024) Inhibition of ACSS2-mediated histone crotonylation alleviates kidney fibrosis via IL-1β-dependent macrophage activation and tubular cell senescence.; Nat Commun, 15: 3200 |
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GSE245390 |
| Li, Liping et al. (2017) Fat mass and obesity-associated (FTO) protein regulates adult neurogenesis.; Hum Mol Genet, 26: 2398-2411 |
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GSE94098 |
| Li, Matthew D et al. (2015) Aging-like changes in the transcriptome of irradiated microglia.; Glia, 63: 754-67 |
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GSE55968 |
| Li, Meihua et al. (2009) Frequent amplification of a chr19q13.41 microRNA polycistron in aggressive primitive neuroectodermal brain tumors.; Cancer Cell, 16: 533-46 |
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GSE14295 |
| Li, Meng et al. (2020) Identification of FMR1-regulated molecular networks in human neurodevelopment.; Genome Res, 30: 361-374 |
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GSE128860 |
| Li, Meng et al. (2022) Dissecting super-enhancer driven transcriptional dependencies reveals novel therapeutic strategies and targets for group 3 subtype medulloblastoma.; J Exp Clin Cancer Res, 41: 311 |
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GSE185024.3 GSE185024.1 |
| Li, Miaomiao et al. (2018) Ythdf2-mediated m6A mRNA clearance modulates neural development in mice.; Genome Biol, 19: 69 |
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GSE104867 |
| Li, Michael Y et al. (2024) TRAF3 loss-of-function reveals the noncanonical NF-κB pathway as a therapeutic target in diffuse large B cell lymphoma.; Proc Natl Acad Sci U S A, 121: e2320421121 |
|
GSE218750 |
| Li, Min-Yin et al. (2017) A Critical Role of Presynaptic Cadherin/Catenin/p140Cap Complexes in Stabilizing Spines and Functional Synapses in the Neocortex.; Neuron, 94: 1155-1172.e8 |
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GSE95629 |
| Li, Ming D et al. (2012) Transcriptome sequencing of gene expression in the brain of the HIV-1 transgenic rat.; PLoS One, 8: e59582 |
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GSE47474 |
| Li, Mingsen et al. (2021) Core transcription regulatory circuitry orchestrates corneal epithelial homeostasis.; Nat Commun, 12: 420 |
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GSE156271 |
| Li, Mingsen et al. (2021) Loss of FOXC1 contributes to the corneal epithelial fate switch and pathogenesis.; Signal Transduct Target Ther, 6: 5 |
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GSE155773 |
| Li, Mingyao et al. (2014) Comprehensive analysis of gene expression in human retina and supporting tissues.; Hum Mol Genet, 23: 4001-14 |
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GSE94437 |
| Li, Mingzhen et al. (2017) Dynamic Expression Changes in the Transcriptome of the Prefrontal Cortex after Repeated Exposure to Cocaine in Mice.; Front Pharmacol, 8: 142 |
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GSE89572 |
| Li, Na et al. (2014) Cyclin C is a haploinsufficient tumour suppressor.; Nat Cell Biol, 16: 1080-91 |
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GSE58712 |
| Li, Na et al. (2014) Identification of chimeric TSNAX-DISC1 resulting from intergenic splicing in endometrial carcinoma through high-throughput RNA sequencing.; Carcinogenesis, 35: 2687-97 |
|
GSE56087 |
| Li, Ni et al. (2022) ARID1A loss induces polymorphonuclear myeloid-derived suppressor cell chemotaxis and promotes prostate cancer progression.; Nat Commun, 13: 7281 |
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GSE197686 GSE213251 |
| Li, Peijun et al. (2017) Loss of CLOCK Results in Dysfunction of Brain Circuits Underlying Focal Epilepsy.; Neuron, 96: 387-401.e6 |
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GSE62019 |
| Li, Peipei et al. (2019) Epigenetic dysregulation of enhancers in neurons is associated with Alzheimer's disease pathology and cognitive symptoms.; Nat Commun, 10: 2246 |
|
GSE110731 |
| Li, Peipei et al. (2020) Hemispheric asymmetry in the human brain and in Parkinson's disease is linked to divergent epigenetic patterns in neurons.; Genome Biol, 21: 61 |
|
GSE135036 |
| Li, Peipei et al. (2021) Gut Microbiota Dysbiosis Is Associated with Elevated Bile Acids in Parkinson's Disease.; Metabolites, 11: [no pages] |
|
GSE135743 |
| Li, Peng et al. (2013) A population of Nestin-expressing progenitors in the cerebellum exhibits increased tumorigenicity.; Nat Neurosci, 16: 1737-44 |
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GSE50824 |
| Li, Peng et al. (2016) Nestin Mediates Hedgehog Pathway Tumorigenesis.; Cancer Res, 76: 5573-83 |
|
GSE84392 |
| Li, Peng et al. (2017) STAT5-mediated chromatin interactions in superenhancers activate IL-2 highly inducible genes: Functional dissection of theIl2ragene locus.; Proc Natl Acad Sci U S A, 114: 12111-12119 |
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GSE102317 |
| Li, Peng et al. (2022) Perirenal adipose afferent nerves sustain pathological high blood pressure in rats.; Nat Commun, 13: 3130 |
|
GSE160914 |
| Li, Pengfei et al. (2019) Systematic Analysis of tRNA-Derived Small RNAs Reveals Novel Potential Therapeutic Targets of Traditional Chinese Medicine (Buyang-Huanwu-Decoction) on Intracerebral Hemorrhage.; Int J Biol Sci, 15: 895-908 |
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GSE109697 |
| Li, Qian et al. (2016) Mice carrying a human GLUD2 gene recapitulate aspects of human transcriptome and metabolome development.; Proc Natl Acad Sci U S A, 113: 5358-63 |
|
GSE80122 |
| Li, Qiao et al. (2025) Long noncoding RNA-dependent control of Myc transcriptional bursting.; Cell Rep, 44: 116439 |
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GSE306107 |
| Li, Qingsheng et al. (2009) Microarray analysis of lymphatic tissue reveals stage-specific, gene expression signatures in HIV-1 infection.; J Immunol, 183: 1975-82 |
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GSE16363 |
| Li, Qingyun et al. (2019) Developmental Heterogeneity of Microglia and Brain Myeloid Cells Revealed by Deep Single-Cell RNA Sequencing.; Neuron, 101: 207-223.e10 |
|
GSE123021 |
| Li, Qiuhui et al. (2018) Linking prostate cancer cell AR heterogeneity to distinct castration and enzalutamide responses.; Nat Commun, 9: 3600 |
|
GSE88752 |
| Li, Qiuling et al. (2018) Histone arginine methylation by Prmt5 is required for lung branching morphogenesis through repression of BMP signaling.; J Cell Sci, 131: [no pages] |
|
GSE229423 |
| Li, Qiyang et al. (2021) Allele-specific DNA methylation maps in monozygotic twins discordant for psychiatric disorders reveal that disease-associated switching at the EIPR1 regulatory loci modulates neural function.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE169512 |
| Li, Quan-Zhen et al. (2011) Risk factors for ANA positivity in healthy persons.; Arthritis Res Ther, 13: R38 |
|
GSE24706 |
| Li, Ranran et al. (2023) ATP-citrate lyase controls endothelial gluco-lipogenic metabolism and vascular inflammation in sepsis-associated organ injury.; Cell Death Dis, 14: 401 |
|
GSE216178 |
| Li, Rui et al. (2020) Chronic IL-1β-induced inflammation regulates epithelial-to-mesenchymal transition memory phenotypes via epigenetic modifications in non-small cell lung cancer.; Sci Rep, 10: 377 |
|
GSE142620 |
| Li, Sanming et al. (2023) DLK-MAPK Signaling Coupled with DNA Damage Promotes Intrinsic Neurotoxicity Associated with Non-Mutated Tau.; Mol Neurobiol, [no vol.]: [no pages] |
|
GSE246259 |
| Li, Shan et al. (2025) Defined cellular reprogramming of androgen receptor-active prostate cancer to neuroendocrine prostate cancer.; bioRxiv, [no vol.]: [no pages] |
|
GSE225017 |
| Li, Shang et al. (2023) Alleviation of Limosilactobacillus reuteri in polycystic ovary syndrome protects against circadian dysrhythmia-induced dyslipidemia via capric acid and GALR1 signaling.; NPJ Biofilms Microbiomes, 9: 47 |
|
GSE169501 |
| Li, Shanshan et al. (2025) DYRK1B phosphorylates FOXO1 to promote hepatic gluconeogenesis.; Nucleic Acids Res, 53: [no pages] |
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GSE262106 |
| Li, Sheng et al. (2019) Gasdermin D in peripheral myeloid cells drives neuroinflammation in experimental autoimmune encephalomyelitis.; J Exp Med, 216: 2562-2581 |
|
GSE126289 |
| Li, Shiqian et al. (2024) HiHo-AID2: boosting homozygous knock-in efficiency enables robust generation of human auxin-inducible degron cells.; Genome Biol, 25: 58 |
|
GSE243637 |
| Li, Shiying et al. (2013) Differential gene expression profiling and biological process analysis in proximal nerve segments after sciatic nerve transection.; PLoS One, 8: e57000 |
|
GSE30165 |
| Li, Shiying et al. (2015) The transcriptional landscape of dorsal root ganglia after sciatic nerve transection.; Sci Rep, 5: 16888 |
|
GSE65053 |
| Li, Shufen et al. (2024) Gain of bipolar disorder-related lncRNA AP1AR-DT in mice induces depressive and anxiety-like behaviors by reducing Negr1-mediated excitatory synaptic transmission.; BMC Med, 22: 543 |
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GSE272752 GSE272753 |
| Li, Shuyu et al. (2008) Assessment of diet-induced obese rats as an obesity model by comparative functional genomics.; Obesity (Silver Spring), 16: 811-8 |
|
GSE8700 |
| Li, Sisi et al. (2016) Genome-wide alterations in hippocampal 5-hydroxymethylcytosine links plasticity genes to acute stress.; Neurobiol Dis, 86: 99-108 |
|
GSE77133 |
| Li, Song et al. (2022) Secreted phosphoprotein 1 slows neurodegeneration and rescues visual function in mouse models of aging and glaucoma.; Cell Rep, 41: 111880 |
|
GSE174523 |