List of all 20,087 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Wang, Yong et al. (2022) Early posttraumatic CSF1R inhibition via PLX3397 leads to time- and sex-dependent effects on inflammation and neuronal maintenance after traumatic brain injury in mice.; Brain Behav Immun, 106: 49-66 |
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GSE196121 |
| Wang, Yongjun et al. (2012) Gene network revealed involvements of Birc2, Birc3 and Tnfrsf1a in anti-apoptosis of injured peripheral nerves.; PLoS One, 7: e43436 |
|
GSE33175 |
| Wang, Yu et al. (2017) Genome-wide transcriptome analysis of hippocampus in rats indicated that TLR/NLR signaling pathway was involved in the pathogenisis of depressive disorder induced by chronic restraint stress.; Brain Res Bull, 134: 195-204 |
|
GSE86392 |
| Wang, Yueqi et al. (2022) Modeling human telencephalic development and autism-associated SHANK3 deficiency using organoids generated from single neural rosettes.; Nat Commun, 13: 5688 |
|
GSE210959 GSE118697 GSE211878 |
| Wang, Yuhan et al. (2019) Developmental Cytoplasmic-to-Nuclear Translocation of RNA-Binding Protein HuR Is Required for Adult Neurogenesis.; Cell Rep, 29: 3101-3117.e7 |
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GSE137323 |
| Wang, Yuhuan et al. (2007) Rotavirus infection alters peripheral T-cell homeostasis in children with acute diarrhea.; J Virol, 81: 3904-12 |
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GSE2729 |
| Wang, Yujie et al. (2020) Genome-Wide Screen of the Hippocampus in Aged Rats Identifies Mitochondria, Metabolism and Aging Processes Implicated in Sevoflurane Anesthesia.; Front Aging Neurosci, 12: 122 |
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GSE141242 |
| Wang, Yuming et al. (2014) Dysregulation of gene expression as a cause of Cockayne syndrome neurological disease.; Proc Natl Acad Sci U S A, 111: 14454-9 |
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GSE58067 GSE58069 |
| Wang, Yun-Peng et al. (2013) Lipocalin-2 negatively modulates the epithelial-to-mesenchymal transition in hepatocellular carcinoma through the epidermal growth factor (TGF-beta1)/Lcn2/Twist1 pathway.; Hepatology, 58: 1349-61 |
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GSE36411 |
| Wang, Yuxin et al. (2021) Reduced Oligodendrocyte Precursor Cell Impairs Astrocytic Development in Early Life Stress.; Adv Sci (Weinh), 8: e2101181 |
|
GSE168479 |
| Wang, Zengtao et al. (2022) Mapping the dynamics of insulin-responsive pathways in the blood-brain barrier endothelium using time-series transcriptomics data.; NPJ Syst Biol Appl, 8: 29 |
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GSE195781 |
| Wang, Zhao et al. (2023) Effects of Fmr1 Gene Mutations on Sex Differences in Autism-Like Behavior and Dendritic Spine Development in Mice and Transcriptomic Studies.; Neuroscience, 534: 16-28 |
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GSE224521 |
| Wang, Zhe et al. (2018) Identifying circRNA-associated-ceRNA networks in the hippocampus of Aβ1-42-induced Alzheimer's disease-like rats using microarray analysis.; Aging (Albany NY), 10: 775-788 |
|
GSE129051 |
| Wang, Zhen et al. (2014) Transcriptome-wide modulation of splicing by the exon junction complex.; Genome Biol, 15: 551 |
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GSE63091 |
| Wang, Zhen et al. (2017) Inhibition of H3K4 demethylation induces autophagy in cancer cell lines.; Biochim Biophys Acta Mol Cell Res, 1864: 2428-2437 |
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GSE89672 |
| Wang, Zheng et al. (2012) Distinct lineage specification roles for NANOG, OCT4, and SOX2 in human embryonic stem cells.; Cell Stem Cell, 10: 440-54 |
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GSE34904 |
| Wang, Zheng et al. (2018) A Non-canonical BCOR-PRC1.1 Complex Represses Differentiation Programs in Human ESCs.; Cell Stem Cell, 22: 235-251.e9 |
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GSE104690 |
| Wang, Zhenghan et al. (2024) TGF-β induces an atypical EMT to evade immune mechanosurveillance in lung adenocarcinoma dormant metastasis.; bioRxiv, [no vol.]: [no pages] |
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GSE269762 |
| Wang, Zhenguo et al. (2024) Vascular smooth muscle cell PRDM16 regulates circadian variation in blood pressure.; J Clin Invest, 135: [no pages] |
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GSE272891 |
| Wang, Zhenning et al. (2024) The phosphatase PP1 sustains global transcription by promoting RNA polymerase II pause release.; Mol Cell, 84: 4824-4842.e7 |
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GSE279150 |
| Wang, Zhijie et al. (2025) Aging reprograms the rhythmic transcriptome in the retina.; Exp Eye Res, 258: 110504 |
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GSE300500 |
| Wang, Zhongyan et al. (2011) Expression profile analysis of the inflammatory response regulated by hepatocyte nuclear factor 4?.; BMC Genomics, 12: 128 |
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GSE15991 |
| Wang, Zhu A et al. (2013) Lineage analysis of basal epithelial cells reveals their unexpected plasticity and supports a cell-of-origin model for prostate cancer heterogeneity.; Nat Cell Biol, 15: 274-83 |
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GSE39509 |
| Wang, Zhuoran et al. (2023) Sustained overexpression of spliced X-box-binding protein-1 in neurons leads to spontaneous seizures and sudden death in mice.; Commun Biol, 6: 252 |
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GSE160263 |
| Wang, Zi-Jun et al. (2021) Autism risk gene KMT5B deficiency in prefrontal cortex induces synaptic dysfunction and social deficits via alterations of DNA repair and gene transcription.; Neuropsychopharmacology, 46: 1617-1626 |
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GSE181807 |
| Wang, Zi-Jun et al. (2022) Molecular and cellular mechanisms for differential effects of chronic social isolation stress in males and females.; Mol Psychiatry, 27: 3056-3068 |
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GSE198725 |
| Wang, Zi-Xin et al. (2025) Direct Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution Unravels Their Distinct Roles in Alzheimer's Disease.; Adv Sci (Weinh), 12: e07843 |
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GSE290949 |
| Wang, Zicong et al. (2024) LncRNA-MM2P regulates retinal neovascularization through M2 macrophage polarization.; Exp Eye Res, 248: 110072 |
|
GSE263978 |
| Wang, Zifeng et al. (2024) FOXA2 rewires AP-1 for transcriptional reprogramming and lineage plasticity in prostate cancer.; Nat Commun, 15: 4914 |
|
GSE232554.1 GSE232554.2 |
| Wang, Zilu et al. (2024) Loss-of-Function but Not Gain-of-Function Properties of Mutant TP53 Are Critical for the Proliferation, Survival, and Metastasis of a Broad Range of Cancer Cells.; Cancer Discov, 14: 362-379 |
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GSE181011 GSE181010 |
| Wang, Zongwei et al. (2017) Androgenic to oestrogenic switch in the human adult prostate gland is regulated by epigenetic silencing of steroid 5α-reductase 2.; J Pathol, 243: 457-467 |
|
GSE101486 |
| Wang, Zuocheng et al. (2013) TIMP2 and TIMP3 have divergent roles in early renal tubulointerstitial injury.; Kidney Int, [no vol.]: [no pages] |
|
GSE42303 |
| Wangzhou, Andi et al. (2020) Pharmacological target-focused transcriptomic analysis of native vs cultured human and mouse dorsal root ganglia.; Pain, 161: 1497-1517 |
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GSE140964 |
| Wani, Abubakar et al. (2021) Neuronal VCP loss of function recapitulates FTLD-TDP pathology.; Cell Rep, 36: 109399 |
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GSE178257 |
| Wani, Gulzar A et al. (2022) Metabolic control of adult neural stem cell self-renewal by the mitochondrial protease YME1L.; Cell Rep, 38: 110370 |
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GSE193551 |
| Wapinski, Orly L et al. (2013) Hierarchical mechanisms for direct reprogramming of fibroblasts to neurons.; Cell, 155: 621-35 |
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GSE43916.1 |
| Ward, Marc A et al. (2016) Insights into the pathogenesis of ulcerative colitis from a murine model of stasis-induced dysbiosis, colonic metaplasia, and genetic susceptibility.; Am J Physiol Gastrointest Liver Physiol, 310: G973-88 |
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GSE71997 |
| Wardell, Suzanne E et al. (2012) Research resource: Transcriptional profiling in a cellular model of breast cancer reveals functional and mechanistic differences between clinically relevant SERM and between SERM/estrogen complexes.; Mol Endocrinol, 26: 1235-48 |
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GSE35428 |
| Warden, Anna S et al. (2020) Microglia Control Escalation of Drinking in Alcohol-Dependent Mice: Genomic and Synaptic Drivers.; Biol Psychiatry, 88: 910-921 |
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GSE142571 |
| Warden, Anna S et al. (2021) Microglia depletion and alcohol: Transcriptome and behavioral profiles.; Addict Biol, 26: e12889 |
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GSE132516 |
| Warden, Anna S et al. (2025) Elevated brain manganese induces motor disease by upregulating the kynurenine pathway of tryptophan metabolism.; Proc Natl Acad Sci U S A, 122: e2423628122 |
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GSE292533 |
| Wardman, Jonathan H et al. (2023) Modelling idiopathic intracranial hypertension in rats: contributions of high fat diet and testosterone to intracranial pressure and cerebrospinal fluid production.; Fluids Barriers CNS, 20: 44 |
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GSE223582 |
| Wardman, Jonathan H et al. (2024) CSF hyperdynamics in rats mimicking the obesity and androgen excess characteristic of patients with idiopathic intracranial hypertension.; Fluids Barriers CNS, 21: 10 |
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GSE232814 |
| Warnatz, Hans-Jörg et al. (2011) The BTB and CNC homology 1 (BACH1) target genes are involved in the oxidative stress response and in control of the cell cycle.; J Biol Chem, 286: 23521-32 |
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GSE28050 |
| Warner-Schmidt, Jennifer et al. (2024) Methylone is a rapid-acting neuroplastogen with less off-target activity than MDMA.; Front Neurosci, 18: 1353131 |
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GSE253280 |
| Warren, Brandon L et al. (2013) Neurobiological sequelae of witnessing stressful events in adult mice.; Biol Psychiatry, 73: 7-14 |
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GSE36005 |
| Warren, Gordon L et al. (2007) Mechanisms of skeletal muscle injury and repair revealed by gene expression studies in mouse models.; J Physiol, 582: 825-41 |
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GSE5413 |
| Warren, H Shaw et al. (2009) A genomic score prognostic of outcome in trauma patients.; Mol Med, 15: 220-7 |
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GSE11375 |
| Warren, Luigi et al. (2010) Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA.; Cell Stem Cell, 7: 618-30 |
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GSE23583 |
| Warren, Timothy A et al. (2016) Expression profiling of cutaneous squamous cell carcinoma with perineural invasion implicates the p53 pathway in the process.; Sci Rep, 6: 34081 |
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GSE86544 |
| Wartman, Lukas D et al. (2012) Expression and function of PML-RARA in the hematopoietic progenitor cells of Ctsg-PML-RARA mice.; PLoS One, 7: e46529 |
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GSE40022 |
| Warwick, Timothy et al. (2021) A hierarchical regulatory network analysis of the vitamin D induced transcriptome reveals novel regulators and complete VDR dependency in monocytes.; Sci Rep, 11: 6518 |
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GSE69284 GSE119551 |
| Waschek, James A et al. (2017) PACAP Promotes Matrix-Driven Adhesion of Cultured Adult Murine Neural Progenitors.; ASN Neuro, 9: 1759091417708720 |
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GSE66193 |
| Waseem, Sahar et al. (2021) Protein Arginine Methyltransferase 1 Is Essential for the Meiosis of Male Germ Cells.; Int J Mol Sci, 22: [no pages] |
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GSE176443 |
| Wasserman, Emily et al. (2021) Human Rhinovirus Infection of the Respiratory Tract Affects Sphingolipid Synthesis.; Am J Respir Cell Mol Biol, [no vol.]: [no pages] |
|
GSE189056 |
| Wassouf, Zinah et al. (2018) Distinct Stress Response and Altered Striatal Transcriptome in Alpha-Synuclein Overexpressing Mice.; Front Neurosci, 12: 1033 |
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GSE116010 GSE116009 |
| Wassouf, Zinah et al. (2018) Environmental Enrichment Prevents Transcriptional Disturbances Induced by Alpha-Synuclein Overexpression.; Front Cell Neurosci, 12: 112 |
|
GSE96961 |
| Wasén, Caroline et al. (2024) Bacteroidota inhibit microglia clearance of amyloid-beta and promote plaque deposition in Alzheimer's disease mouse models.; Nat Commun, 15: 3872 |
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GSE215438 |
| Watanabe, Hiroshi et al. (2008) Prediction of lymphatic metastasis based on gene expression profile analysis after brachytherapy for early-stage oral tongue carcinoma.; Radiother Oncol, 87: 237-42 |
|
GSE4676 |
| Watanabe, Hirotaka et al. (2023) Astrocytic APOE4 genotype-mediated negative impacts on synaptic architecture in human pluripotent stem cell model.; Stem Cell Reports, 18: 1854-1869 |
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GSE206314 |
| Watanabe, Mahiro et al. (2024) Differences in the characteristics and functions of brain and spinal cord regulatory T cells.; J Neuroinflammation, 21: 146 |
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GSE252641 |
| Watanabe, Momoko et al. (2017) Self-Organized Cerebral Organoids with Human-Specific Features Predict Effective Drugs to Combat Zika Virus Infection.; Cell Rep, 21: 517-532 |
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GSE97919 GSE97872 |
| Watanabe, Momoko et al. (2022) TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids.; Stem Cell Reports, 17: 2220-2238 |
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GSE140057 |
| Watanabe, Nobumasa et al. (2025) Tissue degrading and remodelling molecules in giant cell arteritis.; Rheumatology (Oxford), 64: 3095-3103 |
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GSE267979 |
| Watanabe, Sho et al. (2019) TP53Mutation by CRISPR System Enhances the Malignant Potential of Colon Cancer.; Mol Cancer Res, 17: 1459-1467 |
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GSE124349 |
| Watanabe, Tokiko et al. (2013) 1918 Influenza virus hemagglutinin (HA) and the viral RNA polymerase complex enhance viral pathogenicity, but only HA induces aberrant host responses in mice.; J Virol, 87: 5239-54 |
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GSE44595 |
| Watanabe, Toshiaki et al. (2006) Distal colorectal cancers with microsatellite instability (MSI) display distinct gene expression profiles that are different from proximal MSI cancers.; Cancer Res, 66: 9804-8 |
|
GSE4554 |
| Watanabe, Toshiaki et al. (2006) Prediction of sensitivity of rectal cancer cells in response to preoperative radiotherapy by DNA microarray analysis of gene expression profiles.; Cancer Res, 66: 3370-4 |
|
GSE3493 |
| Watanabe, Toshiaki et al. (2007) Gene expression signature and the prediction of ulcerative colitis-associated colorectal cancer by DNA microarray.; Clin Cancer Res, 13: 415-20 |
|
GSE3629 |
| Watanabe, Toshiaki et al. (2009) Gene expression signature for recurrence in stage III colorectal cancers.; Cancer, 115: 283-92 |
|
GSE4526 |
| Watanabe, Toshiaki et al. (2011) Gene expression signature and response to the use of leucovorin, fluorouracil and oxaliplatin in colorectal cancer patients.; Clin Transl Oncol, 13: 419-25 |
|
GSE14095 |
| Watanabe, Toshiaki et al. (2012) Chromosomal instability (CIN) phenotype, CIN high or CIN low, predicts survival for colorectal cancer.; J Clin Oncol, 30: 2256-64 |
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GSE30540 GSE34489 |
| Watanabe, Yasuaki et al. (2025) ALS-associated RNA-binding proteins promote UNC13A transcription through REST downregulation.; EMBO J, 44: 4745-4771 |
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GSE292352 |
| Waterhouse, Mark et al. (2025) CHD8 interacts with BCL11A to induce oncogenic transcription in triple negative breast cancer.; EMBO J, 44: 3448-3467 |
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GSE174186 |
| Waterman, Claire L et al. (2010) An integrated functional genomic study of acute phenobarbital exposure in the rat.; BMC Genomics, 11: 9 |
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GSE18753 |
| Waters, Jennifer A et al. (2024) Omental preadipocytes stimulate matrix remodeling and IGF signaling to support ovarian cancer metastasis.; Cancer Res, [no vol.]: [no pages] |
|
GSE262869 |
| Waters, Katrina M et al. (2009) Cellular dichotomy between anchorage-independent growth responses to bFGF and TPA reflects molecular switch in commitment to carcinogenesis.; Mol Carcinog, 48: 1059-69 |
|
GSE13979 |
| Waters, Katrina M et al. (2009) Macrophage responses to silica nanoparticles are highly conserved across particle sizes.; Toxicol Sci, 107: 553-69 |
|
GSE13005 |
| Waters, Katrina M et al. (2013) Annexin A2 modulates radiation-sensitive transcriptional programming and cell fate.; Radiat Res, 179: 53-61 |
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GSE42547 |
| Waters, Katrina M et al. (2014) ERK oscillation-dependent gene expression patterns and deregulation by stress response.; Chem Res Toxicol, 27: 1496-503 |
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GSE55823 |
| Watford, Wendy T et al. (2008) Tpl2 kinase regulates T cell interferon-gamma production and host resistance to Toxoplasma gondii.; J Exp Med, 205: 2803-12 |
|
GSE12839 |
| Watkins, A James et al. (2012) An integrated genomic and expression analysis of 7q deletion in splenic marginal zone lymphoma.; PLoS One, 7: e44997 |
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GSE35426 GSE35348 |
| Watkins, Trent A et al. (2013) DLK initiates a transcriptional program that couples apoptotic and regenerative responses to axonal injury.; Proc Natl Acad Sci U S A, 110: 4039-44 |
|
GSE96053 |
| Watson, Carolin K et al. (2023) Antifibrotic Drug Nintedanib Inhibits CSF1R to Promote IL-4-associated Tissue Repair Macrophages.; Am J Respir Cell Mol Biol, 68: 366-380 |
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GSE181472 |
| Watson, Dionysios C et al. (2023) GAP43-dependent mitochondria transfer from astrocytes enhances glioblastoma tumorigenicity.; Nat Cancer, 4: 648-664 |
|
GSE183004 |
| Waugh, Katherine A et al. (2023) Triplication of the interferon receptor locus contributes to hallmarks of Down syndrome in a mouse model.; Nat Genet, 55: 1034-1047 |
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GSE218885 GSE218887 |
| Waugh, Sean et al. (2025) Time-course transcriptomics reveals the impact ofTreponema pallidumon microvascular endothelial cell function and phenotype.; Front Microbiol, 16: 1649738 |
|
GSE281329 |
| Wayne, Charlotte R et al. (2023) Distinct Th17 effector cytokines differentially promote microglial and blood-brain barrier inflammatory responses during post-infectious encephalitis.; bioRxiv, [no vol.]: [no pages] |
|
GSE221715 |
| Wazny, Vanessa Kristina et al. (2025) Chronic cerebral hypoperfusion induces venous dysfunction via EPAS1 regulation in mice.; Nat Commun, 16: 6302 |
|
GSE263191 |