List of all 20,073 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Zahn, Jacob M et al. (2006) Transcriptional profiling of aging in human muscle reveals a common aging signature.; PLoS Genet, 2: e115 |
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GSE5086 |
| Zahn, Jacob M et al. (2007) AGEMAP: a gene expression database for aging in mice.; PLoS Genet, 3: e201 |
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GSE9907 GSE9908 |
| Zahoor, Insha et al. (2024) Maresin-1 promotes neuroprotection and prevents disease progression in experimental models of multiple sclerosis through metabolic reprogramming and shaping innate and adaptive disease-associated cell types.; bioRxiv, [no vol.]: [no pages] |
|
GSE276812 |
| Zahr, Siraj K et al. (2018) A Translational Repression Complex in Developing Mammalian Neural Stem Cells that Regulates Neuronal Specification.; Neuron, 97: 520-537.e6 |
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GSE108404 |
| Zahrawi, Frhaan et al. (2025) GLP-1 receptor agonism results in reduction in hepatic ethanol metabolism.; NPJ Metab Health Dis, 3: 36 |
|
GSE291407 |
| Zaidi, M Raza et al. (2011) Interferon-? links ultraviolet radiation to melanomagenesis in mice.; Nature, 469: 548-53 |
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GSE25164 |
| Zajac, Magdalena et al. (2010) Molecular signature of response and potential pathways related to resistance to the HSP90 inhibitor, 17AAG, in breast cancer.; BMC Med Genomics, 3: 44 |
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GSE23209 |
| Zakharov, Pavel N et al. (2020) Single-cell RNA sequencing of murine islets shows high cellular complexity at all stages of autoimmune diabetes.; J Exp Med, 217: [no pages] |
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GSE141784 |
| Zakirova, Zuchra et al. (2018) Mutations in THAP1/DYT6 reveal that diverse dystonia genes disrupt similar neuronal pathways and functions.; PLoS Genet, 14: e1007169 |
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GSE98839 |
| Zakrzewski, Krzysztof et al. (2015) Transcriptional profiles of pilocytic astrocytoma are related to their three different locations, but not to radiological tumor features.; BMC Cancer, 15: 778 |
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GSE73066 |
| Zakutansky, Paul M et al. (2022) The Long Non-Coding RNAGOMAFUin Schizophrenia: Function, Disease Risk, and Beyond.; Cells, 11: [no pages] |
|
GSE206720 |
| Zalenskaya, Irina A et al. (2018) Use of contraceptive depot medroxyprogesterone acetate is associated with impaired cervicovaginal mucosal integrity.; J Clin Invest, 128: 4622-4638 |
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GSE110313 |
| Zamanian, Jennifer L et al. (2012) Genomic analysis of reactive astrogliosis.; J Neurosci, 32: 6391-410 |
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GSE35338.1 GSE35338.2 |
| Zambon, Alexander C et al. (2005) Gene expression patterns define key transcriptional events in cell-cycle regulation by cAMP and protein kinase A.; Proc Natl Acad Sci U S A, 102: 8561-6 |
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GSE2413 |
| Zamek-Gliszczynski, Maciej J et al. (2013) Minor compensatory changes in SAGE Mdr1a (P-gp), Bcrp, and Mrp2 knockout rats do not detract from their utility in the study of transporter-mediated pharmacokinetics.; Drug Metab Dispos, 41: 1174-8 |
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GSE44962 |
| Zamparini, Andrea L et al. (2006) Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal.; Development, 133: 3709-22 |
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GSE5141 |
| Zampese, Enrico et al. (2022) Ca2+channels couple spiking to mitochondrial metabolism in substantia nigra dopaminergic neurons.; Sci Adv, 8: eabp8701 |
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GSE206366 |
| Zanconato, Francesca et al. (2018) Transcriptional addiction in cancer cells is mediated by YAP/TAZ through BRD4.; Nat Med, 24: 1599-1610 |
|
GSE102407 |
| Zandi, Sasan et al. (2012) Single-cell analysis of early B-lymphocyte development suggests independent regulation of lineage specification and commitment in vivo.; Proc Natl Acad Sci U S A, 109: 15871-6 |
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GSE39554 |
| Zanganeh, Pardis F et al. (2022) α-Amino-3-hydroxyl-5-methyl-4-isoxazole-propionate receptor and RNA processing gene dysregulation are early determinants of selective motor neuron vulnerability in a mouse model of amyotrophic lateral sclerosis.; Brain Commun, 4: fcac081 |
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GSE142654 |
| Zangrando, Andrea et al. (2009) MLL rearrangements in pediatric acute lymphoblastic and myeloblastic leukemias: MLL specific and lineage specific signatures.; BMC Med Genomics, 2: 36 |
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GSE14062 |
| Zankharia, Urvi et al. (2024) HIV-induced RSAD2/Viperin supports sustained infection of monocyte-derived macrophages.; J Virol, 98: e0086324 |
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GSE253073 |
| Zanoni, Ivan et al. (2009) CD14 regulates the dendritic cell life cycle after LPS exposure through NFAT activation.; Nature, [no vol.]: [no pages] |
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GSE15718 GSE15721 GSE15720 |
| Zanotto-Filho, Alfeu et al. (2018) Sorafenib improves alkylating therapy by blocking induced inflammation, invasion and angiogenesis in breast cancer cells.; Cancer Lett, 425: 101-115 |
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GSE99536 |
| Zapala, Matthew A et al. (2005) Adult mouse brain gene expression patterns bear an embryologic imprint.; Proc Natl Acad Sci U S A, 102: 10357-62 |
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GSE3594 |
| Zapata, Gerardo et al. (2022) Generation of a mouse model of the neurodevelopmental disorder with dysmorphic facies and distal limb anomalies syndrome.; Hum Mol Genet, 31: 3405-3421 |
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GSE154700 |
| Zapata, Juan Carlos et al. (2013) Transcriptome analysis of human peripheral blood mononuclear cells exposed to Lassa virus and to the attenuated Mopeia/Lassa reassortant 29 (ML29), a vaccine candidate.; PLoS Negl Trop Dis, 7: e2406 |
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GSE41300 |
| Zappia, Katherine J et al. (2016) Mechanosensory and ATP Release Deficits following Keratin14-Cre-Mediated TRPA1 Deletion Despite Absence of TRPA1 in Murine Keratinocytes.; PLoS One, 11: e0151602 |
|
GSE72672 |
| Zarb, Yvette et al. (2021) Microglia control small vessel calcification via TREM2.; Sci Adv, 7: [no pages] |
|
GSE135449 |
| Zare, Abdolhossein et al. (2024) hnRNP R promotes O-GlcNAcylation of eIF4G and facilitates axonal protein synthesis.; Nat Commun, 15: 7430 |
|
GSE242027 |
| Zarkoob, Hadi et al. (2013) Investigating the link between molecular subtypes of glioblastoma, epithelial-mesenchymal transition, and CD133 cell surface protein.; PLoS One, 8: e64169 |
|
GSE34152 |
| Zarse, Kim et al. (2012) Impaired insulin/IGF1 signaling extends life span by promoting mitochondrial L-proline catabolism to induce a transient ROS signal.; Cell Metab, 15: 451-65 |
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GSE36041.2 |
| Zaslavsky, Elena et al. (2010) Antiviral response dictated by choreographed cascade of transcription factors.; J Immunol, 184: 2908-17 |
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GSE18791 |
| Zaslavsky, Elena et al. (2013) Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection.; BMC Bioinformatics, 14 Suppl 6: S1 |
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GSE41067 |
| Zaslavsky, Kirill et al. (2019) SHANK2 mutations associated with autism spectrum disorder cause hyperconnectivity of human neurons.; Nat Neurosci, 22: 556-564 |
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GSE122550 |
| Zavadil, Jessica A et al. (2019) C3HeB/FeJ Mice mimic many aspects of gene expression and pathobiological features of human hepatocellular carcinoma.; Mol Carcinog, 58: 309-320 |
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GSE101818 |
| Zawistowski, Jon S et al. (2017) Enhancer Remodeling during Adaptive Bypass to MEK Inhibition Is Attenuated by Pharmacologic Targeting of the P-TEFb Complex.; Cancer Discov, 7: 302-321 |
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GSE87419.2 GSE87419.1 |
| Zeballos C, M Alejandra et al. (2023) Mitigating a TDP-43 proteinopathy by targeting ataxin-2 using RNA-targeting CRISPR effector proteins.; Nat Commun, 14: 6492 |
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GSE244306 |
| Zeboudj, Lynda et al. (2023) Silencing miR-21-5p in sensory neurons reverses neuropathic allodynia via activation of TGF-β-related pathway in macrophages.; J Clin Invest, 133: [no pages] |
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GSE227608 |
| Zedan, Ahmad et al. (2023) Antiviral Functions of Type I and Type III Interferons in the Olfactory Epithelium.; Biomolecules, 13: [no pages] |
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GSE154235 |
| Zeid, Rhamy et al. (2018) Enhancer invasion shapes MYCN-dependent transcriptional amplification in neuroblastoma.; Nat Genet, 50: 515-523 |
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GSE80149 GSE80153 |
| Zeidler, Maximilian et al. (2021) NOCICEPTRA: Gene and microRNA Signatures and Their Trajectories Characterizing Human iPSC-Derived Nociceptor Maturation.; Adv Sci (Weinh), 8: e2102354 |
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GSE161530 |
| Zeidler-Erdely, Patti C et al. (2010) Response of the mouse lung transcriptome to welding fume: effects of stainless and mild steel fumes on lung gene expression in A/J and C57BL/6J mice.; Respir Res, 11: 70 |
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GSE20174 |
| Zeidner, Joshua F et al. (2020) Immunomodulation with pomalidomide at early lymphocyte recovery after induction chemotherapy in newly diagnosed AML and high-risk MDS.; Leukemia, 34: 1563-1576 |
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GSE130753 |
| Zeier, Zane et al. (2011) Gene expression in the hippocampus: regionally specific effects of aging and caloric restriction.; Mech Ageing Dev, [no vol.]: [no pages] |
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GSE21681 |
| Zeisel, Amit et al. (2011) Coupled pre-mRNA and mRNA dynamics unveil operational strategies underlying transcriptional responses to stimuli.; Mol Syst Biol, 7: 529 |
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GSE24391 |
| Zeitelhofer, Manuel et al. (2020) Blocking PDGF-CC signaling ameliorates multiple sclerosis-like neuroinflammation by inhibiting disruption of the blood-brain barrier.; Sci Rep, 10: 22383 |
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GSE157604 GSE150562 |
| Zeitler, Bryan et al. (2019) Allele-selective transcriptional repression of mutant HTT for the treatment of Huntington's disease.; Nat Med, 25: 1131-1142 |
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GSE127821 GSE127820 |
| Zekavat, Seyedeh M et al. (2023) TP53-mediated clonal hematopoiesis confers increased risk for incident atherosclerotic disease.; Nat Cardiovasc Res, 2: 144-158 |
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GSE184420 |
| Zekri, Yanis et al. (2021) In vitroassessment of pesticides capacity to act as agonists/antagonists of the thyroid hormone nuclear receptors.; iScience, 24: 102957 |
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GSE171038 |
| Zekri, Yanis et al. (2022) An Atlas of Thyroid Hormone Receptors' Target Genes in Mouse Tissues.; Int J Mol Sci, 23: [no pages] |
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GSE210976 |
| Zelic, Matija et al. (2021) RIPK1 activation mediates neuroinflammation and disease progression in multiple sclerosis.; Cell Rep, 35: 109112 |
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GSE172027 GSE154228 GSE154230 |
| Zeller, Jasmin et al. (2011) Assessment of genotoxic effects and changes in gene expression in humans exposed to formaldehyde by inhalation under controlled conditions.; Mutagenesis, 26: 555-61 |
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GSE27263 |
| Zeltner, Nadja et al. (2014) Feeder-free derivation of neural crest progenitor cells from human pluripotent stem cells.; J Vis Exp, [no vol.]: [no pages] |
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GSE50643 |
| Zeltner, Nadja et al. (2016) Capturing the biology of disease severity in a PSC-based model of familial dysautonomia.; Nat Med, 22: 1421-1427 |
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GSE77513 GSE67073 |
| Zemans, Rachel L et al. (2011) Neutrophil transmigration triggers repair of the lung epithelium via beta-catenin signaling.; Proc Natl Acad Sci U S A, 108: 15990-5 |
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GSE31697 |
| Zemke, Martina et al. (2015) Loss of Ezh2 promotes a midbrain-to-forebrain identity switch by direct gene derepression and Wnt-dependent regulation.; BMC Biol, 13: 103 |
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GSE74538 |
| Zemmour, David et al. (2021) Single-cell analysis of FOXP3 deficiencies in humans and mice unmasks intrinsic and extrinsic CD4+T cell perturbations.; Nat Immunol, 22: 607-619 |
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GSE167575.1 GSE167575.2 |
| Zeng, Fanning et al. (2023) Epigenetic combined with transcriptomic analysis of the m6A methylome after spared nerve injury-induced neuropathic pain in mice.; Neural Regen Res, 18: 2545-2552 |
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GSE202166 |
| Zeng, Fanyi et al. (2004) Transcript profiling during preimplantation mouse development.; Dev Biol, 272: 483-96 |
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GSE1744 GSE1391 GSE1745 |
| Zeng, Jianxiong et al. (2019) TRIM9-Mediated Resolution of Neuroinflammation Confers Neuroprotection upon Ischemic Stroke in Mice.; Cell Rep, 27: 549-560.e6 |
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GSE114652 |
| Zeng, Li et al. (2018) Loss of the Spinocerebellar Ataxia type 3 disease protein ATXN3 alters transcription of multiple signal transduction pathways.; PLoS One, 13: e0204438 |
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GSE117028 |
| Zeng, Qi et al. (2023) Transcriptome analysis reveals molecularly distinct subtypes in retinoblastoma.; Sci Rep, 13: 16475 |
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GSE229598 |
| Zeng, Rong et al. (2005) Synergy of IL-21 and IL-15 in regulating CD8+ T cell expansion and function.; J Exp Med, 201: 139-48 |
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GSE2059 |
| Zeng, Shaoxue et al. (2022) Inhibiting the activation of MAPK (ERK1/2) in stressed Müller cells prevents photoreceptor degeneration.; Theranostics, 12: 6705-6722 |
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GSE205370 |
| Zeng, Yaling et al. (2023) Mutant p53R211*ameliorates inflammatory arthritis in AIA rats via inhibition of TBK1-IRF3 innate immune response.; Inflamm Res, 72: 2199-2219 |
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GSE221158 |
| Zeppilli, Sara et al. (2021) Molecular characterization of projection neuron subtypes in the mouse olfactory bulb.; Elife, 10: [no pages] |
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GSE162655 |
| Zer, Cindy et al. (2007) Identification of genomic targets downstream of p38 mitogen-activated protein kinase pathway mediating tumor necrosis factor-alpha signaling.; Physiol Genomics, 31: 343-51 |
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GSE7826 |
| Zha, Congyao et al. (2025) Identifying putative substrates of Calpain-15 in neurodevelopment.; PLoS One, 20: e0319489 |
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GSE287980 |
| Zha, Y et al. (2014) MEIS2 is essential for neuroblastoma cell survival and proliferation by transcriptional control of M-phase progression.; Cell Death Dis, 5: e1417 |
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GSE56003 |
| Zhai, Lijie et al. (2021) Tumor Cell IDO Enhances Immune Suppression and Decreases Survival Independent of Tryptophan Metabolism in Glioblastoma.; Clin Cancer Res, 27: 6514-6528 |
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GSE175700 |
| Zhai, Yali et al. (2007) Gene expression analysis of preinvasive and invasive cervical squamous cell carcinomas identifies HOXC10 as a key mediator of invasion.; Cancer Res, 67: 10163-72 |
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GSE7803 |
| Zhan, Lixuan et al. (2023) Attenuation of Piwil2 induced by hypoxic postconditioning prevents cerebral ischemic injury by inhibiting CREB2 promoter methylation.; Brain Pathol, 33: e13109 |
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GSE163298 |
| Zhang, Ailin et al. (2023) Concurrent Targeting of HDAC and PI3K to Overcome Phenotypic Heterogeneity of Castration-resistant and Neuroendocrine Prostate Cancers.; Cancer Res Commun, 3: 2358-2374 |
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GSE223758 |
| Zhang, Benyue et al. (2014) Viral infection. Prevention and cure of rotavirus infection via TLR5/NLRC4-mediated production of IL-22 and IL-18.; Science, 346: 861-5 |
|
GSE62479 |
| Zhang, Bin et al. (2010) Effective targeting of quiescent chronic myelogenous leukemia stem cells by histone deacetylase inhibitors in combination with imatinib mesylate.; Cancer Cell, 17: 427-42 |
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GSE20876 |
| Zhang, Bin et al. (2023) CHRM3 is a novel prognostic factor of poor prognosis and promotes glioblastoma progression via activation of oncogenic invasive growth factors.; Oncol Res, 31: 917-927 |
|
GSE220083 |
| Zhang, Bin et al. (2024) Tumour-associated macrophages and Schwann cells promote perineural invasion via paracrine loop in pancreatic ductal adenocarcinoma.; Br J Cancer, 130: 542-554 |
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GSE194205 |
| Zhang, Bo et al. (2023) KDM2B regulates hippocampal morphogenesis by transcriptionally silencing Wnt signaling in neural progenitors.; Nat Commun, 14: 6489 |
|
GSE222464 |
| Zhang, Chao et al. (2022) A Long-Term Clearing Cranial Window for Longitudinal Imaging of Cortical and Calvarial Ischemic Injury through the Intact Skull.; Adv Sci (Weinh), 9: e2105893 |
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GSE191183 |
| Zhang, Chao et al. (2022) Systematic analysis of brain and skull ischemic injury expression profiles reveals associations of the tumor immune microenvironment and cell death with ischemic stroke.; Front Immunol, 13: 1082546 |
|
GSE213429 |
| Zhang, Chaolin et al. (2010) Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls.; Science, 329: 439-43 |
|
GSE22115 |
| Zhang, Chenfeng et al. (2024) Chronic stress deficits in reward behaviour co-occur with low nucleus accumbens dopamine activity during reward anticipation specifically.; Commun Biol, 7: 966 |
|
GSE268460 |
| Zhang, Cheng et al. (2023) STAT3 promotes RNA polymerase III-directed transcription by controlling the miR-106a-5p/TP73 axis.; Elife, 12: [no pages] |
|
GSE201548 |
| Zhang, Chi et al. (2018) Endothelial Cell-Specific Inactivation of TSPAN12 (Tetraspanin 12) Reveals Pathological Consequences of Barrier Defects in an Otherwise Intact Vasculature.; Arterioscler Thromb Vasc Biol, 38: 2691-2705 |
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GSE113878 |
| Zhang, Chi et al. (2024) Human birth tissue products as a non-opioid medicine to inhibit post-surgical pain.; bioRxiv, [no vol.]: [no pages] |
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GSE242389 |