List of all 22,539 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Zhao, Xiaojie et al. (2022) HIV Tat and cocaine interactively alter genome-wide DNA methylation and gene expression and exacerbate learning and memory impairments.; Cell Rep, 39: 110765 |
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GSE200189 |
| Zhao, Xinghua et al. (2025) Ezh2 Regulates Early Astrocyte Morphogenesis and Influences the Coverage of Astrocytic Endfeet on the Vasculature.; Cell Prolif, [no vol.]: e70015 |
|
GSE283622 |
| Zhao, Xingwang et al. (2021) Identification of key biomarkers and immune infiltration in systemic lupus erythematosus by integrated bioinformatics analysis.; J Transl Med, 19: 35 |
|
GSE4588 |
| Zhao, Xinhui et al. (2022) PU.1-c-Jun interaction is crucial for PU.1 function in myeloid development.; Commun Biol, 5: 961 |
|
GSE27873 |
| Zhao, Xiumei et al. (2012) Global gene expression profiling confirms the molecular fidelity of primary tumor-based orthotopic xenograft mouse models of medulloblastoma.; Neuro Oncol, 14: 574-83 |
|
GSE28192 |
| Zhao, Xuan et al. (2024) Increased neutrophil extracellular traps caused by diet-induced obesity delay fracture healing.; FASEB J, 38: e70126 |
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GSE268729 |
| Zhao, Xuesong et al. (2015) RAS/MAPK Activation Drives Resistance to Smo Inhibition, Metastasis, and Tumor Evolution in Shh Pathway-Dependent Tumors.; Cancer Res, 75: 3623-35 |
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GSE69359 |
| Zhao, Yan et al. (2023) PGF2αfacilitates pathological retinal angiogenesis by modulating endothelial FOS-driven ELR+CXC chemokine expression.; EMBO Mol Med, 15: e16373 |
|
GSE164199 |
| Zhao, Yan et al. (2024) Inhibition of endothelial histone deacetylase 2 shifts endothelial-mesenchymal transitions in cerebral arteriovenous malformation models.; J Clin Invest, 134: [no pages] |
|
GSE262300 |
| Zhao, Yang et al. (2008) Two supporting factors greatly improve the efficiency of human iPSC generation.; Cell Stem Cell, 3: 475-9 |
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GSE12922 |
| Zhao, Yang et al. (2015) A XEN-like State Bridges Somatic Cells to Pluripotency during Chemical Reprogramming.; Cell, 163: 1678-91 |
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GSE73631 |
| Zhao, Yinan et al. (2020) Oligodendroglial connexin 47 regulates neuroinflammation upon autoimmune demyelination in a novel mouse model of multiple sclerosis.; Proc Natl Acad Sci U S A, 117: 2160-2169 |
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GSE121335 GSE121337 |
| Zhao, Ying-Tao et al. (2013) Loss of MeCP2 function is associated with distinct gene expression changes in the striatum.; Neurobiol Dis, 59: 257-66 |
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GSE42895 |
| Zhao, Yongbing et al. (2022) "Stripe" transcription factors provide accessibility to co-binding partners in mammalian genomes.; Mol Cell, [no vol.]: [no pages] |
|
GSE164901 |
| Zhao, Yu et al. (2023) Multiscale 3D genome reorganization during skeletal muscle stem cell lineage progression and aging.; Sci Adv, 9: eabo1360 |
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GSE189839 GSE189840 |
| Zhao, Yuan et al. (2023) METTL3-Dependent N6-Methyladenosine Modification Programs Human Neural Progenitor Cell Proliferation.; Int J Mol Sci, 24: [no pages] |
|
GSE242521 |
| Zhao, Yue et al. (2016) High-Resolution Mapping of RNA Polymerases Identifies Mechanisms of Sensitivity and Resistance to BET Inhibitors in t(8;21) AML.; Cell Rep, 16: 2003-16 |
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GSE83660.1 GSE83660.2 |
| Zhao, Yuechao et al. (2019) P53-R273H mutation enhances colorectal cancer stemness through regulating specific lncRNAs.; J Exp Clin Cancer Res, 38: 379 |
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GSE124993 |
| Zhao, Zhigang et al. (2015) Combined Loss of Tet1 and Tet2 Promotes B Cell, but Not Myeloid Malignancies, in Mice.; Cell Rep, 13: 1692-704 |
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GSE73611 |
| Zhao, Zibo et al. (2021) PAX9 Determines Epigenetic State Transition and Cell Fate in Cancer.; Cancer Res, 81: 4696-4708 |
|
GSE164247 |
| Zharikova, Anastasia A et al. (2025) Analysis of the brain transcriptome, microbiome and metabolome in ketogenic diet and experimental stroke.; Brain Behav Immun, 123: 571-585 |
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GSE272485 |
| Zhen, Aileen W et al. (2013) The small molecule, genistein, increases hepcidin expression in human hepatocytes.; Hepatology, 58: 1315-25 |
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GSE40069 |
| Zhen, Tao et al. (2017) Chd7deficiency delays leukemogenesis in mice induced byCbfb-MYH11.; Blood, 130: 2431-2442 |
|
GSE102388 |
| Zhen, Tao et al. (2020) RUNX1 and CBF?-SMMHC transactivate target genes together in abnormal myeloid progenitors for leukemia development.; Blood, 136: 2373-2385 |
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GSE152573.3 |
| Zheng, Bin et al. (2010) PGC-1?, a potential therapeutic target for early intervention in Parkinson's disease.; Sci Transl Med, 2: 52ra73 |
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GSE20153 GSE20141 GSE20164 GSE20146 GSE20314 GSE20163 GSE20333 GSE24378 GSE20159 |
| Zheng, Bin et al. (2023) Distinct layers of BRD4-PTEFb reveal bromodomain-independent function in transcriptional regulation.; Mol Cell, 83: 2896-2910.e4 |
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GSE232869 |
| Zheng, Chao et al. (2025) Distinct transcriptomic and epigenomic responses of mature oligodendrocytes during disease progression in a mouse model of multiple sclerosis.; Nat Neurosci, 28: 2612-2627 |
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GSE283086 |
| Zheng, Ge et al. (2024) A tetramer of BCL11A is required for stable protein production and fetal hemoglobin silencing.; Science, 386: 1010-1018 |
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GSE263968.1 |
| Zheng, Jin et al. (2019) Diminished OPA1 expression and impaired mitochondrial morphology and homeostasis in Aprataxin-deficient cells.; Nucleic Acids Res, 47: 4086-4110 |
|
GSE114786 |
| Zheng, Jin et al. (2022) Pyk2 suppresses contextual fear memory in an autophosphorylation-independent manner.; J Mol Cell Biol, 13: 808-821 |
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GSE180598 GSE158606 |
| Zheng, Lingling et al. (2014) Biological pathway selection through Bayesian integrative modeling.; Stat Appl Genet Mol Biol, 13: 435-57 |
|
GSE52403 |
| Zheng, Lirong et al. (2025) The growth factor FGF21 maintains neuromuscular junction through histone deacetylase HDAC4 in denervation-induced skeletal muscle atrophy.; J Biol Chem, 301: 110756 |
|
GSE303861 |
| Zheng, Qi-Min et al. (2023) Transcriptome Analysis of the Mouse Medial Prefrontal Cortex in a Chronic Constriction Injury Model.; Neuromolecular Med, [no vol.]: [no pages] |
|
GSE225145 |
| Zheng, Qingfei et al. (2024) Bidirectional histone monoaminylation dynamics regulate neural rhythmicity.; Nature, 637: 974-982 |
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GSE270429 |
| Zheng, Qiupeng et al. (2016) Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.; Nat Commun, 7: 11215 |
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GSE77661 |
| Zheng, Shirong et al. (2016) Renal Protection by Genetic Deletion of the Atypical Chemokine Receptor ACKR2 in Diabetic OVE Mice.; J Diabetes Res, 2016: 5362506 |
|
GSE51205 |
| Zheng, Xiaofeng et al. (2016) CNOT3-Dependent mRNA Deadenylation Safeguards the Pluripotent State.; Stem Cell Reports, 7: 897-910 |
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GSE84953 |
| Zheng, Xinde et al. (2016) Metabolic reprogramming during neuronal differentiation from aerobic glycolysis to neuronal oxidative phosphorylation.; Elife, 5: [no pages] |
|
GSE75719 |
| Zheng, Yan et al. (2013) Egr2-dependent gene expression profiling and ChIP-Seq reveal novel biologic targets in T cell anergy.; Mol Immunol, 55: 283-91 |
|
GSE46242 |
| Zheng, Yang et al. (2019) Deep Sequencing of Somatosensory Neurons Reveals Molecular Determinants of Intrinsic Physiological Properties.; Neuron, 103: 598-616.e7 |
|
GSE131230 |
| Zheng, Yingxia et al. (2022) PRMT5 Deficiency Enforces the Transcriptional and Epigenetic Programs of Klrg1+CD8+Terminal Effector T Cells and Promotes Cancer Development.; J Immunol, 208: 501-513 |
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GSE186851 |
| Zheng, Yingxia et al. (2023) Prmt5 deficiency inhibits CD4+ T-cell Klf2/S1pr1 expression and ameliorates EAE disease.; J Neuroinflammation, 20: 183 |
|
GSE195874 |
| Zheng, Yiqiao et al. (2023) Missense mutations in CRX homeodomain cause dominant retinopathies through two distinct mechanisms.; Elife, 12: [no pages] |
|
GSE223439 |
| Zheng, Yonghe et al. (2022) Role of complement C1q/C3-CR3 signaling in brain injury after experimental intracerebral hemorrhage and the effect of minocycline treatment.; Front Immunol, 13: 919444 |
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GSE206971 |
| Zheng, Yonghe et al. (2025) Gut microbiota depletion accelerates hematoma resolution and neurological recovery after intracerebral hemorrhage via p-coumaric acid-promoted Treg differentiation.; Theranostics, 15: 6628-6650 |
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GSE266602 |
| Zheng, Yuanjia et al. (2019) Transcriptome Analysis on Maternal Separation Rats With Depression-Related Manifestations Ameliorated by Electroacupuncture.; Front Neurosci, 13: 314 |
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GSE124387 |
| Zheng, Yue et al. (2023) Histone methylation mediated by NSD1 is required for the establishment and maintenance of neuronal identities.; Cell Rep, 42: 113496 |
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GSE229337 |
| Zheng, Zhaofeng et al. (2024) The ATF4-RPS19BP1 axis modulates ribosome biogenesis to promote erythropoiesis.; Blood, 144: 742-756 |
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GSE233677 |
| Zheng, Zhi-Wei et al. (2026) Molecular brake on firing pattern transitions in MHbChATneurons to mediate nicotine-withdrawal-induced anxiety.; Neuron, [no vol.]: [no pages] |
|
GSE319475 |
| Zhi, Xiaofei et al. (2025) Nociceptive neurons promote gastric tumour progression via a CGRP-RAMP1 axis.; Nature, [no vol.]: [no pages] |
|
GSE243578 |
| Zhong, Haihong et al. (2016) A Novel IL6 Antibody Sensitizes Multiple Tumor Types to Chemotherapy Including Trastuzumab-Resistant Tumors.; Cancer Res, 76: 480-90 |
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GSE62941 |
| Zhong, Hao et al. (2023) Alternating current stimulation promotes neurite outgrowth and plasticity in neurons through activation of the PI3K/AKT signaling pathway.; Acta Biochim Biophys Sin (Shanghai), 55: 1718-1729 |
|
GSE207117 |
| Zhong, Ke et al. (2024) A Synthetic Steroid 5α-Androst-3β, 5, 6β-triol Alleviates Radiation-Induced Brain Injury in Mice via Inhibiting GBP5/NF-κB/NLRP3 Signal Axis.; Mol Neurobiol, 61: 4074-4089 |
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GSE230636 |
| Zhong, PingShan et al. (2024) Blockade of histamine receptor H1 augments immune checkpoint therapy by enhancing MHC-I expression in pancreatic cancer cells.; J Exp Clin Cancer Res, 43: 138 |
|
GSE251639 |
| Zhong, Rong et al. (2015) Notch1 Activation or Loss Promotes HPV-Induced Oral Tumorigenesis.; Cancer Res, 75: 3958-3969 |
|
GSE59951 |
| Zhong, Rui et al. (2025) The HDL-Mimetic Peptide 4F Mitigates Vascular and Cortical Amyloid Pathology and Associated Neuroinflammation in a Transgenic Mouse Model of Cerebral Amyloid Angiopathy and Alzheimer's Disease.; Mol Neurobiol, [no vol.]: [no pages] |
|
GSE271286 |
| Zhong, Shaoping et al. (2024) Microglia contribute to polyG-dependent neurodegeneration in neuronal intranuclear inclusion disease.; Acta Neuropathol, 148: 21 |
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GSE269183 |
| Zhong, Xiancai et al. (2022) Decoupling the role of RORγt in the differentiation and effector function of TH17 cells.; Sci Adv, 8: eadc9221 |
|
GSE211414 |
| Zhong, Yinchun et al. (2024) Systematic identification and characterization of exon-intron circRNAs.; Genome Res, 34: 376-393 |
|
GSE241679 |
| Zhou, Baiyu et al. (2010) Analysis of factorial time-course microarrays with application to a clinical study of burn injury.; Proc Natl Acad Sci U S A, 107: 9923-8 |
|
GSE19743 |
| Zhou, Bo et al. (2015) Loss of NFIX Transcription Factor Biases Postnatal Neural Stem/Progenitor Cells Toward Oligodendrogenesis.; Stem Cells Dev, 24: 2114-26 |
|
GSE65337 |
| Zhou, Chenlin et al. (2016) Comprehensive profiling reveals mechanisms of SOX2-mediated cell fate specification in human ESCs and NPCs.; Cell Res, 26: 171-89 |
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GSE69476 |
| Zhou, Dewei et al. (2023) Generation of renal tubular organoids from adult SOX9+kidney progenitor cells.; Life Med, 2: lnad047 |
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GSE120049 |
| Zhou, Feng et al. (2017) Oncolytic Reactivation of KSHV as a Therapeutic Approach for Primary Effusion Lymphoma.; Mol Cancer Ther, 16: 2627-2638 |
|
GSE89478 |
| Zhou, Guokun et al. (2021) RNA-Seq analysis of knocking out the neuroprotective proton-sensitive GPR68 on basal and acute ischemia-induced transcriptome changes and signaling in mouse brain.; FASEB J, 35: e21461 |
|
GSE303321 |
| Zhou, Hang et al. (2024) Metabolic reprograming mediated by tumor cell-intrinsic type I IFN signaling is required for CD47-SIRPα blockade efficacy.; Nat Commun, 15: 5759 |
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GSE235111 GSE235112 |
| Zhou, Hao et al. (2024) Osteocyte mitochondria inhibit tumor development via STING-dependent antitumor immunity.; Sci Adv, 10: eadi4298 |
|
GSE235103 |
| Zhou, Harry Y et al. (2014) A Sox2 distal enhancer cluster regulates embryonic stem cell differentiation potential.; Genes Dev, 28: 2699-711 |
|
GSE58339 |
| Zhou, Hong et al. (2025) Nicotinamide mononucleotide promotes female germline stem cell proliferation by activating the H4K16ac-Hmgb1-Fyn-PLD signaling pathway through epigenetic remodeling.; Cell Biosci, 15: 48 |
|
GSE248652 |
| Zhou, Jia et al. (2022) NMDA receptor-dependent prostaglandin-endoperoxide synthase 2 induction in neurons promotes glial proliferation during brain development and injury.; Cell Rep, 38: 110557 |
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GSE139080 GSE89802 |
| Zhou, Jia et al. (2023) Zika virus leads to olfactory disorders in mice by targeting olfactory ensheathing cells.; EBioMedicine, 89: 104457 |
|
GSE214567 |
| Zhou, Jian et al. (2022) Disruption of MeCP2-TCF20 complex underlies distinct neurodevelopmental disorders.; Proc Natl Acad Sci U S A, 119: [no pages] |
|
GSE179229 |
| Zhou, Jianbiao et al. (2011) PRL-3, a metastasis associated tyrosine phosphatase, is involved in FLT3-ITD signaling and implicated in anti-AML therapy.; PLoS One, 6: e19798 |
|
GSE26114 |
| Zhou, Jiayue et al. (2021) Integrated Transcriptomic and Proteomic Analysis Reveals Up-Regulation of Apoptosis and Small Heat Shock Proteins in Lens of Rats Under Low Temperature.; Front Physiol, 12: 683056 |
|
GSE173481 |
| Zhou, Jin et al. (2006) AT1 receptor blockade regulates the local angiotensin II system in cerebral microvessels from spontaneously hypertensive rats.; Stroke, 37: 1271-6 |
|
GSE2739 |
| Zhou, Jingxu et al. (2013) MicroRNA-326 functions as a tumor suppressor in glioma by targeting the Nin one binding protein (NOB1).; PLoS One, 8: e68469 |
|
GSE45921 |
| Zhou, Junjie et al. (2022) SERBP1 affects the apoptotic level by regulating the expression and alternative splicing of cellular and metabolic process genes in HeLa cells.; PeerJ, 10: e14084 |
|
GSE192950 |
| Zhou, Kai et al. (2022) An overlooked subset of Cx3cr1wt/wtmicroglia in the Cx3cr1CreER-Eyfp/wtmouse has a repopulation advantage over Cx3cr1CreER-Eyfp/wtmicroglia following microglial depletion.; J Neuroinflammation, 19: 20 |
|
GSE186700 |
| Zhou, Lan-Ting et al. (2023) Tau pathology epigenetically remodels the neuron-glial cross-talk in Alzheimer's disease.; Sci Adv, 9: eabq7105 |
|
GSE193826 |
| Zhou, Lei et al. (2012) Cardiac gene activation analysis in mammalian non-myoblasic cells by Nkx2-5, Tbx5, Gata4 and Myocd.; PLoS One, 7: e48028 |
|
GSE27329 |
| Zhou, Li et al. (2008) The IL-10 and IFN-gamma pathways are essential to the potent immunosuppressive activity of cultured CD8+ NKT-like cells.; Genome Biol, 9: R119 |
|
GSE10813 |
| Zhou, Li et al. (2022) Hepatocyte-Specific Knock-Out of Nfib Aggravates Hepatocellular Tumorigenesis via Enhancing Urea Cycle.; Front Mol Biosci, 9: 875324 |
|
GSE200708 |
| Zhou, Lixiao et al. (2024) Mina53 demethylates histone H4 arginine 3 asymmetric dimethylation to regulate neural stem/progenitor cell identity.; Nat Commun, 15: 10227 |
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GSE275270 GSE232829 |
| Zhou, Lixiao et al. (2025) Mina53 catalyzes arginine demethylation of p53 to promote tumor growth.; Cell Rep, 44: 115242 |
|
GSE214730 |
| Zhou, Luo-Qi et al. (2023) Staged suppression of microglial autophagy facilitates regeneration in CNS demyelination by enhancing the production of linoleic acid.; Proc Natl Acad Sci U S A, 120: e2209990120 |
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GSE198559 |