List of all 22,539 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Zhu, Xiaocui et al. (2004) Analysis of the major patterns of B cell gene expression changes in response to short-term stimulation with 33 single ligands.; J Immunol, 173: 7141-9 |
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GSE376 GSE381 GSE375 GSE380 GSE378 GSE390 GSE384 GSE377 GSE383 GSE400 GSE386 GSE379 GSE391 GSE385 GSE394 GSE402 GSE388 GSE393 GSE401 GSE387 GSE396 GSE395 GSE389 GSE398 GSE397 GSE399 GSE374 GSE373 |
| Zhu, Xiaodong et al. (2016) Role of Tet1/3 Genes and Chromatin Remodeling Genes in Cerebellar Circuit Formation.; Neuron, 89: 100-12 |
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GSE74400 |
| Zhu, Xiaoqi et al. (2020) Metformin improves cognition of aged mice by promoting cerebral angiogenesis and neurogenesis.; Aging (Albany NY), 12: 17845-17862 |
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GSE140715 |
| Zhu, Xiaoqi et al. (2023) Akkermansia muciniphila, which is enriched in the gut microbiota by metformin, improves cognitive function in aged mice by reducing the proinflammatory cytokine interleukin-6.; Microbiome, 11: 120 |
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GSE162123 |
| Zhu, Xiaoyue et al. (2022) Impact of Aβ40 and Aβ42 Fibrils on the Transcriptome of Primary Astrocytes and Microglia.; Biomedicines, 10: [no pages] |
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GSE211198 |
| Zhu, Xiaoyue et al. (2025) Cell signaling communication within papillary craniopharyngioma revealed by an integrated analysis of single-cell RNA sequencing and bulk RNA sequencing.; J Transl Med, 23: 124 |
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GSE243682 |
| Zhu, XingLiang et al. (2023) Tdrd3-null mice show post-transcriptional and behavioral impairments associated with neurogenesis and synaptic plasticity.; Res Sq, [no vol.]: [no pages] |
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GSE223567 |
| Zhu, Y et al. (2017) Macrophage Transcriptional Profile Identifies Lipid Catabolic Pathways That Can Be Therapeutically Targeted after Spinal Cord Injury.; J Neurosci, 37: 2362-2376 |
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GSE84737 |
| Zhu, Yan et al. (2024) CRISPR screening identifies BET and mTOR inhibitor synergy in cholangiocarcinoma through serine glycine one carbon.; JCI Insight, 9: [no pages] |
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GSE248632 |
| Zhu, Yi et al. (2025) 3'UTR shortening alleviates miRNA repression of mRNAs critical for muscle stem cell differentiation.; EMBO J, [no vol.]: [no pages] |
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GSE287180 |
| Zhu, Yihui et al. (2022) Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism.; Genome Biol, 23: 46 |
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GSE178205 |
| Zhu, Ying et al. (2023) Astrocytes in the Optic Nerve Are Heterogeneous in Their Reactivity to Glaucomatous Injury.; Cells, 12: [no pages] |
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GSE139605 |
| Zhu, Yingli et al. (2024) Disruption of MAM integrity in mutant FUS oligodendroglial progenitors from hiPSCs.; Acta Neuropathol, 147: 6 |
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GSE239403 |
| Zhu, Yirong et al. (2016) Pubertal and adult windows of susceptibility to a high animal fat diet in Trp53-null mammary tumorigenesis.; Oncotarget, 7: 83409-83423 |
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GSE74294 |
| Zhu, Yiyi et al. (2025) Reduced Notch signaling in hypothalamic endothelial cells mediates obesity-induced alterations in glucose uptake and insulin signaling.; Cell Rep, 44: 115522 |
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GSE210620.2 GSE210620.1 |
| Zhu, Yuan et al. (2010) Differential gene expression in mouse retina related to regional differences in vulnerability to hyperoxia.; Mol Vis, 16: 740-55 |
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GSE21246 |
| Zhu, Yuan Xiao et al. (2011) Cereblon expression is required for the antimyeloma activity of lenalidomide and pomalidomide.; Blood, 118: 4771-9 |
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GSE31421 |
| Zhu, Yue et al. (2024) HDAC1 and HDAC2 orchestrate Wnt signaling to regulate neural progenitor transition during brain development.; iScience, 27: 110600 |
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GSE251727 |
| Zhu, Yunhua et al. (2014) Phosphatase WIP1 regulates adult neurogenesis and WNT signaling during aging.; J Clin Invest, 124: 3263-73 |
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GSE57105 |
| Zhu, Zhexin et al. (2023) Mitotic bookmarking by SWI/SNF subunits.; Nature, 618: 180-187 |
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GSE216656 GSE189557 |
| Zhu, Zhou et al. (2012) Dose-dependent effects of small-molecule antagonists on the genomic landscape of androgen receptor binding.; BMC Genomics, 13: 355 |
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GSE32892 |
| Zhu, Ziai et al. (2026) Vip+vagal neurons control allergen-induced responses.; Cell Rep, 45: 117287 |
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GSE306848 |
| Zhuang, Mengru et al. (2023) YTHDF2 in dentate gyrus is the m6A reader mediating m6A modification in hippocampus-dependent learning and memory.; Mol Psychiatry, 28: 1679-1691 |
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GSE171790 |
| Zhuang, Rulin et al. (2022) Perivascular Fibrosis Is Mediated by a KLF10-IL-9 Signaling Axis in CD4+ T Cells.; Circ Res, 130: 1662-1681 |
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GSE199288.2 GSE199288.3 |
| Zhuang, Xiaoxuan et al. (2024) Functional genomics identifies N-acetyllactosamine extension of complex N-glycans as a mechanism to evade lysis by natural killer cells.; Cell Rep, 43: 114105 |
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GSE228188 |
| Zhuang, Yanrong et al. (2023) Circadian clocks are modulated by compartmentalized oscillating translation.; Cell, 186: 3245-3260.e23 |
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GSE222433 |
| Zhuo, Ran et al. (2024) CDK5RAP3 is a novel super-enhancer-driven gene activated by master TFs and regulates ER-Phagy in neuroblastoma.; Cancer Lett, 591: 216882 |
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GSE260772 |
| Ziegelbauer, Joseph M et al. (2009) Tandem array-based expression screens identify host mRNA targets of virus-encoded microRNAs.; Nat Genet, 41: 130-4 |
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GSE12967 |
| Ziegler, Karin A et al. (2023) Immune-mediated denervation of the pineal gland underlies sleep disturbance in cardiac disease.; Science, 381: 285-290 |
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GSE231763 |
| Zietara, Adrian et al. (2025) Potassium supplementation and depletion during development of salt-sensitive hypertension in male and female SS rats.; JCI Insight, 10: [no pages] |
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GSE255582 |
| Ziff, Oliver J et al. (2022) Meta-analysis of human and mouse ALS astrocytes reveals multi-omic signatures of inflammatory reactive states.; Genome Res, 32: 71-84 |
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GSE160133 |
| Ziff, Oliver J et al. (2023) Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition.; Neuron, 111: 3011-3027.e7 |
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GSE214017 |
| Ziff, Oliver J et al. (2025) Mutations in PSEN1 predispose inflammation in an astrocyte model of familial Alzheimer's disease through disrupted regulated intramembrane proteolysis.; Mol Neurodegener, 20: 73 |
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GSE298491 |
| Ziliotto, Rachel et al. (2014) PU.1 promotes cell cycle exit in the murine myeloid lineage associated with downregulation of E2F1.; Exp Hematol, 42: 204-217.e1 |
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GSE52577 |
| Zilkha-Falb, Rina et al. (2017) Prickle1 as positive regulator of oligodendrocyte differentiation.; Neuroscience, 364: 107-121 |
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GSE76968 |
| Zilli, Federica et al. (2021) The NFIB-ERO1A axis promotes breast cancer metastatic colonization of disseminated tumour cells.; EMBO Mol Med, 13: e13162 |
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GSE144392 GSE144393 |
| Zilliox, Michael J et al. (2007) Gene expression changes in peripheral blood mononuclear cells during measles virus infection.; Clin Vaccine Immunol, [no vol.]: [no pages] |
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GSE5808 |
| Zimmer, Michael et al. (2008) Small-molecule inhibitors of HIF-2a translation link its 5'UTR iron-responsive element to oxygen sensing.; Mol Cell, 32: 838-48 |
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GSE13818 |
| Zimmermann, Elias Josef et al. (2023) Biological impact of sequential exposures to allergens and ultrafine particle-rich combustion aerosol on human bronchial epithelial BEAS-2B cells at the air liquid interface.; J Appl Toxicol, 43: 1225-1241 |
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GSE216533 |
| Zimmermann, Tina et al. (2022) BI 456906: Discovery and preclinical pharmacology of a novel GCGR/GLP-1R dual agonist with robust anti-obesity efficacy.; Mol Metab, 66: 101633 |
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GSE211105 |
| Zimmers, Teresa A et al. (2017) Epidermal growth factor receptor restoration rescues the fatty liver regeneration in mice.; Am J Physiol Endocrinol Metab, 313: E440-E449 |
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GSE33296 |
| Zimyanin, Vitaly et al. (2026) Compartment-specific transcriptome of motor neurons reveals impaired extracellular matrix signaling and activated cell cycle kinases in FUS-ALS.; Neurobiol Dis, 219: 107268 |
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GSE276214 |
| Zindy, Frederique et al. (2007) Genetic alterations in mouse medulloblastomas and generation of tumors de novo from primary cerebellar granule neuron precursors.; Cancer Res, 67: 2676-84 |
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GSE6463 |
| Zingariello, M et al. (2017) The thrombopoietin/MPL axis is activated in the Gata1lowmouse model of myelofibrosis and is associated with a defective RPS14 signature.; Blood Cancer J, 7: e572 |
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GSE89629 GSE89628 |
| Zini, Roberta et al. (2017) CALR mutational status identifies different disease subtypes of essential thrombocythemia showing distinct expression profiles.; Blood Cancer J, 7: 638 |
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GSE103237 |
| Zink, Annika et al. (2026) Pluripotent stem-cell-based screening uncovers sildenafil as a mitochondrial disease therapy.; Cell, 189: 1656-1679.e42 |
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GSE292178 |
| Zippo, Alessio et al. (2007) PIM1-dependent phosphorylation of histone H3 at serine 10 is required for MYC-dependent transcriptional activation and oncogenic transformation.; Nat Cell Biol, 9: 932-44 |
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GSE7960 |
| Zismanov, Victoria et al. (2015) Multiple myeloma proteostasis can be targeted via translation initiation factor eIF4E.; Int J Oncol, 46: 860-70 |
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GSE27897 |
| Zitzmann, Michael et al. (2015) Gene expression patterns in relation to the clinical phenotype in Klinefelter syndrome.; J Clin Endocrinol Metab, 100: E518-23 |
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GSE42331 |
| Zivraj, Krishna H et al. (2010) Subcellular profiling reveals distinct and developmentally regulated repertoire of growth cone mRNAs.; J Neurosci, 30: 15464-78 |
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GSE25166.1 |
| Zlotnik, Dor et al. (2022) P450 oxidoreductase regulates barrier maturation by mediating retinoic acid metabolism in a model of the human BBB.; Stem Cell Reports, 17: 2050-2063 |
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GSE202485 |
| Zoellner, Nele et al. (2022) Synthetic mimetics assigned a major role to IFNAR2 in type I interferon signaling.; Front Microbiol, 13: 947169 |
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GSE202839 |
| Zoetemelk, Marloes et al. (2020) Optimized low-dose combinatorial drug treatment boosts selectivity and efficacy of colorectal carcinoma treatment.; Mol Oncol, 14: 2894-2919 |
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GSE142340 |
| Zohren, Fabian et al. (2012) The transcription factor Lyl-1 regulates lymphoid specification and the maintenance of early T lineage progenitors.; Nat Immunol, 13: 761-9 |
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GSE38681 |
| Zongaro, Samantha et al. (2013) The 3' UTR of FMR1 mRNA is a target of miR-101, miR-129-5p and miR-221: implications for the molecular pathology of FXTAS at the synapse.; Hum Mol Genet, 22: 1971-82 |
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GSE43670 |
| Zook, Erin C et al. (2018) Transcription factor ID2 prevents E proteins from enforcing a naïve T lymphocyte gene program during NK cell development.; Sci Immunol, 3: [no pages] |
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GSE109456 |
| Zornetzer, Gregory A et al. (2010) Transcriptomic analysis reveals a mechanism for a prefibrotic phenotype in STAT1 knockout mice during severe acute respiratory syndrome coronavirus infection.; J Virol, 84: 11297-309 |
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GSE36016 |
| Zorzan, Irene et al. (2023) Chemical conversion of human conventional PSCs to TSCs following transient naive gene activation.; EMBO Rep, 24: e55235 |
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GSE184562 |
| Zou, Han et al. (2023) A neurodevelopmental epigenetic programme mediated by SMARCD3-DAB1-Reelin signalling is hijacked to promote medulloblastoma metastasis.; Nat Cell Biol, 25: 493-507 |
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GSE194213 |
| Zou, Hong et al. (2014) Chronic alcohol consumption from adolescence-to-adulthood in mice--hypothalamic gene expression changes in the dilated cardiomyopathy signaling pathway.; BMC Neurosci, 15: 61 |
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GSE42770 |
| Zou, Kexin et al. (2021) Intrauterine hyperglycemia impairs memory across two generations.; Transl Psychiatry, 11: 434 |
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GSE147039 |
| Zou, Wenqing et al. (2024) The circadian gene ARNTL2 promotes nasopharyngeal carcinoma invasiveness and metastasis through suppressing AMOTL2-LATS-YAP pathway.; Cell Death Dis, 15: 466 |
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GSE234440 |
| Zou, Wenzheng et al. (2024) Lysosomal dynamics regulate mammalian cortical neurogenesis.; Dev Cell, 59: 64-78.e5 |
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GSE205681 |
| Zou, Wenzheng et al. (2025) FOXQ1 Regulates Brain Endothelial Mitochondrial Function by Orchestrating Calcium Signaling and Cristae Morphology.; Adv Sci (Weinh), 12: e03082 |
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GSE271827 |
| Zou, Xiaoting et al. (2016) Acetoacetate Accelerates Muscle Regeneration and Ameliorates Muscular Dystrophy in Mice.; J Biol Chem, 291: 2181-95 |
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GSE55423 |
| Zou, Yunzhi et al. (2024) FTO-mediated DSP m6A demethylation promotes an aggressive subtype of growth hormone-secreting pituitary neuroendocrine tumors.; Mol Cancer, 23: 205 |
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GSE269044 |
| Zöller, Tanja et al. (2018) Silencing of TGFβ signalling in microglia results in impaired homeostasis.; Nat Commun, 9: 4011 |
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GSE115652 GSE115757 |