Class CliExpressionExperimentAuditServiceImpl

java.lang.Object

ubic.gemma.cli.audit.CliExpressionExperimentAuditServiceImpl

All Implemented Interfaces:

CliExpressionExperimentAuditService

@Service
public class CliExpressionExperimentAuditServiceImpl
extends Object
implements CliExpressionExperimentAuditService

Default CliExpressionExperimentAuditService implementation. The recordMade* methods are pure annotation-driven audit emitters (empty body); computeSampleCorrelation actually runs the work because the audit emission shape is AuditedOnError, which only fires when the wrapped invocation throws.

The two distinct @AuditedOnError declarations match the legacy shape verbatim: FilteringException produced a typed audit row in the CLI's first catch, every other Exception produced one in the second. The aspect's most-specific-instanceof dispatch chooses the filtering-exception variant when it applies; otherwise the default Throwable declaration acts as the catch-all.

Constructor Summary

Constructors

Constructor	Description
CliExpressionExperimentAuditServiceImpl()

Method Summary

Modifier and Type	Method	Description
void	computeSampleCorrelation(ExpressionExperiment ee)	Runs the sample-correlation compute step for an experiment.
void	recordMadePrivate(ExpressionExperiment ee, String note)	Records a MakePrivateEvent on the experiment.
void	recordMadePublic(ExpressionExperiment ee, String note)	Records a MakePublicEvent on the experiment.

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

CliExpressionExperimentAuditServiceImpl

public CliExpressionExperimentAuditServiceImpl()

Method Details

recordMadePrivate

@Audited(value=MakePrivateEvent.class,
         messageSpel="#note")
public void recordMadePrivate(ExpressionExperiment ee,
 String note)

Description copied from interface: CliExpressionExperimentAuditService

Records a MakePrivateEvent on the experiment. Used by MakeExperimentPrivateCli.

Specified by:

recordMadePrivate in interface CliExpressionExperimentAuditService

recordMadePublic

@Audited(value=MakePublicEvent.class,
         messageSpel="#note")
public void recordMadePublic(ExpressionExperiment ee,
 String note)

Description copied from interface: CliExpressionExperimentAuditService

Records a MakePublicEvent on the experiment. Used by MakeExperimentsPublicCli.

Specified by:

recordMadePublic in interface CliExpressionExperimentAuditService

computeSampleCorrelation

@AuditedOnError(value=FailedSampleCorrelationAnalysisEvent.class,exception=FilteringException.class) @AuditedOnError(FailedSampleCorrelationAnalysisEvent.class)
public void computeSampleCorrelation(ExpressionExperiment ee)
                              throws FilteringException

Description copied from interface: CliExpressionExperimentAuditService

Runs the sample-correlation compute step for an experiment. The annotation surface records a FailedSampleCorrelationAnalysisEvent if the call throws (either a FilteringException or any other Exception). Used by ExpressionDataCorrMatCli.

Specified by:

computeSampleCorrelation in interface CliExpressionExperimentAuditService

Throws:

FilteringException