Package ubic.gemma.cli.util

Class EntityOptionsUtils

java.lang.Object

ubic.gemma.cli.util.EntityOptionsUtils

public class EntityOptionsUtils
extends Object

Utilities for adding options to the CLI that can subsequently be retrieved with EntityLocator.

Author:

poirigui

Constructor Summary

Constructors

Constructor	Description
EntityOptionsUtils()

Method Summary

Modifier and Type	Method	Description
static void	addCommaDelimitedPlatformOption(org.apache.commons.cli.Options options, String optionName, String longOpt, String description)	Add an option for supplying a comma-delimited list of platforms.
static void	addDatasetOption(org.apache.commons.cli.Options options, String optionName, String longOpt, String description)	Add an option for supplying a dataset.
static void	addExperimentSetOption(org.apache.commons.cli.Options options, String optionName, String longOpt, String description)	Add an option for supplying an EE set.
static void	addGenericPlatformOption(org.apache.commons.cli.Options options, String optionName, String longOpt, String description)	Add an option for supplying a generic platform.
static void	addPlatformOption(org.apache.commons.cli.Options options, String optionName, String longOpt, String description)	Add an option for supplying a platform.
static void	addTaxonOption(org.apache.commons.cli.Options options, String optionName, String longOpt, String description)	Add an option for supplying a taxon.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

EntityOptionsUtils

public EntityOptionsUtils()

Method Detail

addDatasetOption

public static void addDatasetOption(org.apache.commons.cli.Options options,
                                    String optionName,
                                    String longOpt,
                                    String description)

Add an option for supplying a dataset.

addExperimentSetOption

public static void addExperimentSetOption(org.apache.commons.cli.Options options,
                                          String optionName,
                                          String longOpt,
                                          String description)

Add an option for supplying an EE set.

addTaxonOption

public static void addTaxonOption(org.apache.commons.cli.Options options,
                                  String optionName,
                                  String longOpt,
                                  String description)

Add an option for supplying a taxon.

addCommaDelimitedPlatformOption

public static void addCommaDelimitedPlatformOption(org.apache.commons.cli.Options options,
                                                   String optionName,
                                                   String longOpt,
                                                   String description)

Add an option for supplying a comma-delimited list of platforms.

addPlatformOption

public static void addPlatformOption(org.apache.commons.cli.Options options,
                                     String optionName,
                                     String longOpt,
                                     String description)

Add an option for supplying a platform.

addGenericPlatformOption

public static void addGenericPlatformOption(org.apache.commons.cli.Options options,
                                            String optionName,
                                            String longOpt,
                                            String description)

Add an option for supplying a generic platform.