Uses of Class
ubic.gemma.core.analysis.expression.coexpression.links.LinkAnalysis
Packages that use LinkAnalysis
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Uses of LinkAnalysis in ubic.gemma.core.analysis.expression.coexpression.links
Methods in ubic.gemma.core.analysis.expression.coexpression.links that return LinkAnalysisModifier and TypeMethodDescriptionLinkAnalysisService.process(ExpressionExperiment ee, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig) Run a link analysis on an experiment, and persist the results if the configuration says to.LinkAnalysisServiceImpl.process(ExpressionExperiment ee, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig) LinkAnalysisService.processVectors(Taxon t, Collection<ProcessedExpressionDataVector> dataVectors, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig) Used when the input is data vectors from another source, instead of from a DB-bound expressionExperiment.LinkAnalysisServiceImpl.processVectors(Taxon t, Collection<ProcessedExpressionDataVector> dataVectors, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig) Methods in ubic.gemma.core.analysis.expression.coexpression.links with parameters of type LinkAnalysisModifier and TypeMethodDescriptionvoidLinkAnalysisPersister.saveLinksToDb(LinkAnalysis la) Persist links to the database.voidLinkAnalysisPersisterImpl.saveLinksToDb(LinkAnalysis la)