Uses of Class
ubic.gemma.core.analysis.expression.coexpression.links.LinkAnalysisConfig
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Packages that use LinkAnalysisConfig Package Description ubic.gemma.core.analysis.expression.coexpression.links ubic.gemma.core.tasks.analysis.coexp -
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Uses of LinkAnalysisConfig in ubic.gemma.core.analysis.expression.coexpression.links
Methods in ubic.gemma.core.analysis.expression.coexpression.links that return LinkAnalysisConfig Modifier and Type Method Description LinkAnalysisConfig
LinkAnalysis. getConfig()
Methods in ubic.gemma.core.analysis.expression.coexpression.links with parameters of type LinkAnalysisConfig Modifier and Type Method Description LinkAnalysis
LinkAnalysisService. process(ExpressionExperiment ee, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig)
Run a link analysis on an experiment, and persist the results if the configuration says to.LinkAnalysis
LinkAnalysisServiceImpl. process(ExpressionExperiment ee, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig)
LinkAnalysis
LinkAnalysisService. processVectors(Taxon t, Collection<ProcessedExpressionDataVector> dataVectors, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig)
Used when the input is data vectors from another source, instead of from a DB-bound expressionExperiment.LinkAnalysis
LinkAnalysisServiceImpl. processVectors(Taxon t, Collection<ProcessedExpressionDataVector> dataVectors, FilterConfig filterConfig, LinkAnalysisConfig linkAnalysisConfig)
Constructors in ubic.gemma.core.analysis.expression.coexpression.links with parameters of type LinkAnalysisConfig Constructor Description LinkAnalysis(LinkAnalysisConfig config)
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Uses of LinkAnalysisConfig in ubic.gemma.core.tasks.analysis.coexp
Methods in ubic.gemma.core.tasks.analysis.coexp that return LinkAnalysisConfig Modifier and Type Method Description LinkAnalysisConfig
LinkAnalysisTaskCommand. getLinkAnalysisConfig()
Constructors in ubic.gemma.core.tasks.analysis.coexp with parameters of type LinkAnalysisConfig Constructor Description LinkAnalysisTaskCommand(ExpressionExperiment ee, LinkAnalysisConfig lac, FilterConfig fg)
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