Package ubic.gemma.core.analysis.preprocess

Class SplitExperimentServiceImpl

java.lang.Object

ubic.gemma.core.analysis.preprocess.SplitExperimentServiceImpl

All Implemented Interfaces:

SplitExperimentService

@Service
@Transactional(propagation=NEVER)
public class SplitExperimentServiceImpl
extends Object
implements SplitExperimentService

Split an experiment into multiple experiments. This is needed when a load EE (e.g. from GEO) is better represented as two more distinct experiments. The decision of what to split is based on curation guidelines documented elsewhere.

Author:

paul

Constructor Summary

Constructors

Constructor	Description
SplitExperimentServiceImpl()

Method Summary

Modifier and Type	Method	Description
ExpressionExperimentSet	split(ExpressionExperiment toSplit, ExperimentalFactor splitOn, boolean postProcess)	Split an experiment into multiple experiments based on a factor.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

SplitExperimentServiceImpl

public SplitExperimentServiceImpl()

Method Details

split

public ExpressionExperimentSet split(ExpressionExperiment toSplit,
 ExperimentalFactor splitOn,
 boolean postProcess)

Description copied from interface: SplitExperimentService

Split an experiment into multiple experiments based on a factor. The new experiments will automatically be given short names to suit and the names will be appended with an indicator of the split.

Specified by:

split in interface SplitExperimentService

Parameters:

toSplit - the experiment to split

splitOn - the factor to split the experiment on

postProcess - post-process the experiments resulting from the split

Returns:

results of the split