BulkExpressionDataPrimitiveDoubleMatrix (Gemma 1.32.4 API)

All Superinterfaces:: BulkExpressionDataMatrix<Double>, ExpressionDataMatrix<Double>, ExpressionDataPrimitiveDoubleMatrix

All Known Implementing Classes:: BulkExpressionDataDoubleMatrix, ExpressionDataDoubleMatrix

public interface BulkExpressionDataPrimitiveDoubleMatrix extends BulkExpressionDataMatrix<Double>, ExpressionDataPrimitiveDoubleMatrix

Interface for bulk expression data matrices that can be efficiently accessed as a primitive double matrix.

Author:: poirigui

Method Summary

Modifier and Type

Method

Description

double[]

getColumnAsDoubles(BioAssay bioAssay)

Retrieve the given column without boxing.

double[][]

getRawMatrixAsDoubles()

Obtain the raw matrix as a double array.

Methods inherited from interface ubic.gemma.core.datastructure.matrix.BulkExpressionDataMatrix
get, getBioAssayDimension, getBioAssayForColumn, getBioMaterialForColumn, getColumn, getColumnIndex, getColumnIndex, getRawMatrix, hasMissingValues

Methods inherited from interface ubic.gemma.core.datastructure.matrix.ExpressionDataMatrix
columns, get, getColumn, getDesignElementForRow, getDesignElements, getExpressionExperiment, getQuantitationType, getRow, getRow, getRowElement, getRowElements, getRowIndex, getRowIndices, rows, sliceRows

Methods inherited from interface ubic.gemma.core.datastructure.matrix.ExpressionDataPrimitiveDoubleMatrix
getAsDouble, getColumnAsDoubles, getRowAsDoubles, getRowAsDoubles

Method Details
- getColumnAsDoubles
  
  double[] getColumnAsDoubles(BioAssay bioAssay)
  
  Retrieve the given column without boxing.
  See Also:
  
  BulkExpressionDataMatrix.getColumn(BioAssay)
- getRawMatrixAsDoubles
  
  double[][] getRawMatrixAsDoubles()
  
  Obtain the raw matrix as a double array.
  See Also:
  
  BulkExpressionDataMatrix.getRawMatrix()