Package ubic.gemma.core.datastructure.matrix.io

Interface ExpressionDataMatrixWriter

All Known Subinterfaces:

BulkExpressionDataMatrixWriter, SingleCellExpressionDataMatrixWriter

All Known Implementing Classes:

MatrixWriter, MexMatrixWriter, TabularMatrixWriter

public interface ExpressionDataMatrixWriter

Base interface for writing ExpressionDataMatrix.

Author:

poirigui

Method Summary

Modifier and Type	Method	Description
void	setScaleType(ScaleType scaleType)	Set the scale type to use when writing the matrix.
default int	write(ExpressionDataMatrix<?> matrix, OutputStream stream)
int	write(ExpressionDataMatrix<?> matrix, Writer writer)

Method Detail

setScaleType

void setScaleType(@Nullable
                  ScaleType scaleType)

Set the scale type to use when writing the matrix.

When null, the original values must be used.

write

int write(ExpressionDataMatrix<?> matrix,
          Writer writer)
   throws IOException,
          UnsupportedOperationException

Throws:

IOException

UnsupportedOperationException

write

default int write(ExpressionDataMatrix<?> matrix,
                  OutputStream stream)
           throws IOException

Throws:

IOException