Package ubic.gemma.model.common.quantitationtype

Enum ScaleType

java.lang.Object

java.lang.Enum<ScaleType>

ubic.gemma.model.common.quantitationtype.ScaleType

All Implemented Interfaces:

Serializable, Comparable<ScaleType>

public enum ScaleType
extends Enum<ScaleType>

Enum Constant Summary

Enum Constants

Enum Constant	Description
COUNT	Indicates value was (originally) an integer count of something, such as RNAseq reads.
FOLDCHANGE	Deprecated, do not use.
LINEAR	This is effectively the opposite of "log-transformed" (or any other transformation)
LN
LOG10
LOG1P	Data is log-transformed as per ln X + 1
LOG2
LOGBASEUNKNOWN
OTHER
PERCENT	Constrained to be a value between 0 and 100.
PERCENT1	Constrained to be a value between 0 and 1.
UNSCALED	An unscaled measurement is one that has no inherent scale; e.g., a categorial value.

Method Summary

Modifier and Type	Method	Description
static ScaleType	valueOf(String name)	Returns the enum constant of this type with the specified name.
static ScaleType[]	values()	Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

LINEAR

public static final ScaleType LINEAR

This is effectively the opposite of "log-transformed" (or any other transformation)

LN

public static final ScaleType LN

LOG2

public static final ScaleType LOG2

LOG10

public static final ScaleType LOG10

LOG1P

public static final ScaleType LOG1P

Data is log-transformed as per ln X + 1

LOGBASEUNKNOWN

public static final ScaleType LOGBASEUNKNOWN

FOLDCHANGE

public static final ScaleType FOLDCHANGE

Deprecated, do not use.

OTHER

public static final ScaleType OTHER

UNSCALED

public static final ScaleType UNSCALED

An unscaled measurement is one that has no inherent scale; e.g., a categorial value.

PERCENT1

public static final ScaleType PERCENT1

Constrained to be a value between 0 and 1.

PERCENT

public static final ScaleType PERCENT

Constrained to be a value between 0 and 100.

COUNT

public static final ScaleType COUNT

Indicates value was (originally) an integer count of something, such as RNAseq reads. This does not mean the value is necessarily an integer.

Method Detail

values

public static ScaleType[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (ScaleType c : ScaleType.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static ScaleType valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null