Interface GoldenPathSequenceAnalysisFactory

All Known Implementing Classes:

GoldenPathSequenceAnalysisFactoryImpl

public interface GoldenPathSequenceAnalysisFactory

Factory for GoldenPathSequenceAnalysis instances.

Provides a Spring-injectable seam so callers do not instantiate GoldenPathSequenceAnalysis directly. Test contexts can register a primary bean that returns a Mockito mock, allowing fast (non-GoldenPath) variants of tests that exercise the processArrayDesign pipeline.

Each call to create(Taxon) returns a new GoldenPathSequenceAnalysis; the caller owns the lifecycle (typically via try-with-resources, since the returned instance implements AutoCloseable).

Author:

goldenpath-factory-refactor

Method Summary

Modifier and Type	Method	Description
GoldenPathSequenceAnalysis	create(Taxon taxon)	Construct a new GoldenPathSequenceAnalysis for the given taxon.

Method Details

create

GoldenPathSequenceAnalysis create(Taxon taxon)

Construct a new GoldenPathSequenceAnalysis for the given taxon.

The returned instance holds JDBC resources and must be closed by the caller.

Parameters:

taxon - the taxon whose GoldenPath database should back the analysis

Returns:

a new, open GoldenPathSequenceAnalysis