Package ubic.gemma.core.loader.expression.cellxgene

Class CellXGeneAnnDataSingleCellDataConfigurer

java.lang.Object

ubic.gemma.core.loader.expression.cellxgene.CellXGeneAnnDataSingleCellDataConfigurer

All Implemented Interfaces:

DataLoaderConfigurer<AnnDataSingleCellDataLoader,SingleCellDataLoaderConfig>, SingleCellDataLoaderConfigurer<AnnDataSingleCellDataLoader>

public class CellXGeneAnnDataSingleCellDataConfigurer
extends Object
implements SingleCellDataLoaderConfigurer<AnnDataSingleCellDataLoader>

Configures a AnnDataSingleCellDataLoader for CELLxGENE datasets.

Author:

poirigui

Constructor Summary

Constructors

Constructor	Description
CellXGeneAnnDataSingleCellDataConfigurer(Path annDataFile, SingleCellDataTransformationFactory singleCellDataTransformationFactory)
CellXGeneAnnDataSingleCellDataConfigurer(Path annDataFile, SingleCellDataTransformationFactory singleCellDataTransformationFactory, Path cellXGeneTransposedPath)

Method Summary

Modifier and Type	Method	Description
AnnDataSingleCellDataLoader	configureLoader(SingleCellDataLoaderConfig config)	Create a DataLoader from the given configuration.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

CellXGeneAnnDataSingleCellDataConfigurer

public CellXGeneAnnDataSingleCellDataConfigurer(Path annDataFile,
 SingleCellDataTransformationFactory singleCellDataTransformationFactory,
 Path cellXGeneTransposedPath)

CellXGeneAnnDataSingleCellDataConfigurer

public CellXGeneAnnDataSingleCellDataConfigurer(Path annDataFile,
 SingleCellDataTransformationFactory singleCellDataTransformationFactory)

Method Details

configureLoader

public AnnDataSingleCellDataLoader configureLoader(SingleCellDataLoaderConfig config)

Description copied from interface: DataLoaderConfigurer

Create a DataLoader from the given configuration.

Specified by:

configureLoader in interface DataLoaderConfigurer<AnnDataSingleCellDataLoader,SingleCellDataLoaderConfig>