Class GeoDomainObjectGeneratorLocal
- java.lang.Object
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- ubic.gemma.core.loader.expression.geo.GeoDomainObjectGenerator
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- ubic.gemma.core.loader.expression.geo.GeoDomainObjectGeneratorLocal
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- All Implemented Interfaces:
SourceDomainObjectGenerator
public class GeoDomainObjectGeneratorLocal extends GeoDomainObjectGenerator
GEO object generator that works on local files. Created partly to assist in testing.- Author:
- pavlidis
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Field Summary
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Fields inherited from class ubic.gemma.core.loader.expression.geo.GeoDomainObjectGenerator
datasetFetcher, log, parser, platformFetcher, seriesFetcher
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Constructor Summary
Constructors Constructor Description GeoDomainObjectGeneratorLocal(String fileLocation)
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Method Summary
All Methods Instance Methods Concrete Methods Modifier and Type Method Description void
initialize()
Initialize fetchers, clear out any data that was already generated by this Generator.-
Methods inherited from class ubic.gemma.core.loader.expression.geo.GeoDomainObjectGenerator
generate, getProjectedAccessions, processDataSet, setDatasetFetcher, setDoSampleMatching, setPlatformFetcher, setProcessPlatformsOnly, setSeriesFetcher
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Constructor Detail
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GeoDomainObjectGeneratorLocal
public GeoDomainObjectGeneratorLocal(String fileLocation)
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Method Detail
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initialize
public void initialize()
Description copied from class:GeoDomainObjectGenerator
Initialize fetchers, clear out any data that was already generated by this Generator.- Overrides:
initialize
in classGeoDomainObjectGenerator
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