Uses of Class
ubic.gemma.core.loader.expression.geo.service.GeoRetrieveConfig

Packages that use GeoRetrieveConfig

Package	Description
ubic.gemma.apps	This package contains built-in Gemma CLI applications.
ubic.gemma.core.loader.expression.geo.service

Uses of GeoRetrieveConfig in ubic.gemma.apps

Fields in ubic.gemma.apps declared as GeoRetrieveConfig

Modifier and Type	Field	Description
static final GeoRetrieveConfig	GeoGrabberCli.MINIMAL	Preset when seeking records.

Uses of GeoRetrieveConfig in ubic.gemma.core.loader.expression.geo.service

Fields in ubic.gemma.core.loader.expression.geo.service declared as GeoRetrieveConfig

Modifier and Type	Field	Description
static GeoRetrieveConfig	GeoRetrieveConfig.DEFAULT	Default preset for retrieving GEO records.
static GeoRetrieveConfig	GeoRetrieveConfig.DETAILED	A preset configuration for retrieving detailed GEO records.

Methods in ubic.gemma.core.loader.expression.geo.service that return GeoRetrieveConfig

Modifier and Type	Method	Description
GeoRetrieveConfig	GeoRetrieveConfig.GeoRetrieveConfigBuilder.build()

Methods in ubic.gemma.core.loader.expression.geo.service with parameters of type GeoRetrieveConfig

Modifier and Type	Method	Description
GeoRecord	GeoBrowser.getGeoRecord(GeoRecordType recordType, String accession, GeoRetrieveConfig config)	Retrieve a single GEO record.
GeoRecord	GeoBrowserImpl.getGeoRecord(GeoRecordType recordType, String accession, GeoRetrieveConfig config)
Collection<GeoRecord>	GeoBrowser.getGeoRecords(GeoRecordType recordType, Collection<String> accessions, GeoRetrieveConfig config)	Retrieve a collection of GEO series.
Collection<GeoRecord>	GeoBrowserImpl.getGeoRecords(GeoRecordType recordType, Collection<String> accessions, GeoRetrieveConfig config)	Retrieve records for experiments
Collection<GeoRecord>	GeoBrowser.retrieveAllGeoRecords(GeoQuery query, GeoRetrieveConfig config)
Collection<GeoRecord>	GeoBrowserImpl.retrieveAllGeoRecords(GeoQuery query, GeoRetrieveConfig config)
Slice<GeoRecord>	GeoBrowser.retrieveGeoRecords(GeoQuery query, int start, int pageSize, GeoRetrieveConfig config)	Retrieve records from a GEO query.
Slice<GeoRecord>	GeoBrowserImpl.retrieveGeoRecords(GeoQuery query, int start, int pageSize, GeoRetrieveConfig config)