Package ubic.gemma.core.loader.expression.sequencing

Class SequencingMetadata

java.lang.Object
ubic.gemma.core.loader.expression.sequencing.SequencingMetadata
public class SequencingMetadata extends Object
Represents sequencing metadata for a BioAssay.
Author:
poirigui

  • Method Details

    • builder

      public static SequencingMetadata.SequencingMetadataBuilder builder()

    • getReadLength

      @Nullable public Integer getReadLength()
      The length of the reads.

      If reads are paired, this is the sum of the length of each mate, not the fragment length.

      This is null if unknown.

    • getReadCount

      @Nullable public Long getReadCount()
      The number of reads in the library.

      This is null if unknown.

    • getIsPaired

      @Nullable public Boolean getIsPaired()
      Whether the reads are paired.

      This is null if unknown.

    • setReadLength

      public void setReadLength(@Nullable Integer readLength)
      The length of the reads.

      If reads are paired, this is the sum of the length of each mate, not the fragment length.

      This is null if unknown.

    • setReadCount

      public void setReadCount(@Nullable Long readCount)
      The number of reads in the library.

      This is null if unknown.

    • setIsPaired

      public void setIsPaired(@Nullable Boolean isPaired)
      Whether the reads are paired.

      This is null if unknown.

    • equals

      public boolean equals(Object o)
      Overrides:
      equals in class Object

    • canEqual

      protected boolean canEqual(Object other)

    • hashCode

      public int hashCode()
      Overrides:
      hashCode in class Object

    • toString

      public String toString()
      Overrides:
      toString in class Object