Class ObsoleteTermCorrectionTaskCommand

java.lang.Object

ubic.gemma.core.job.TaskCommand

ubic.gemma.core.tasks.maintenance.ObsoleteTermCorrectionTaskCommand

All Implemented Interfaces:

Serializable

public class ObsoleteTermCorrectionTaskCommand
extends TaskCommand

Rewrite annotations using obsolete ontology terms to the successors their ontologies assert.

Author:

phase 3 ontology maintenance

See Also:

• Serialized Form

Field Summary

Fields inherited from class TaskCommand

MAX_QUEUING_MILLIS, MAX_RUNTIME_MILLIS

Constructor Summary

Constructors

Constructor	Description
ObsoleteTermCorrectionTaskCommand(Collection<String> uris, boolean dryRun, int timeoutSeconds)

Method Summary

Modifier and Type	Method	Description
Class<? extends Task<? extends TaskCommand>>	getTaskClass()	Obtain the class of the Task object that will be run for this command.
int	getTimeoutSeconds()
Collection<String>	getUris()
boolean	isDryRun()

Methods inherited from class TaskCommand

getMaxQueueMillis, getMaxRuntimeMillis, getPersistJobDetails, getSecurityContext, getSubmitter, isEmailAlert, setEmailAlert, setMaxQueueMillis, setMaxRuntimeMillis, setPersistJobDetails

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ObsoleteTermCorrectionTaskCommand

public ObsoleteTermCorrectionTaskCommand(Collection<String> uris,
 boolean dryRun,
 int timeoutSeconds)

Method Details

getTaskClass

public Class<? extends Task<? extends TaskCommand>> getTaskClass()

Description copied from class: TaskCommand

Obtain the class of the Task object that will be run for this command.

If null, the task command cannot be submitted through TaskRunningService.submitTaskCommand(TaskCommand) and a task object must be explicitly created.

For now, this how we map from TaskCommand to Task that actually runs it. We have to have this mapping somewhere until we make Tasks themselves serializable. Tasks are not readily serializable because they have dependencies to Spring services. at which point TaskCommand can be deprecated(or remain as TaskContext).

Overrides:

getTaskClass in class TaskCommand

getUris

public Collection<String> getUris()

isDryRun

public boolean isDryRun()

getTimeoutSeconds

public int getTimeoutSeconds()