Package ubic.gemma.model.analysis.expression.diff

Class DiffExprGeneSearchResult

java.lang.Object
ubic.gemma.model.analysis.expression.diff.DiffExprGeneSearchResult
All Implemented Interfaces:
Serializable
Direct Known Subclasses:
MissingResult, NonRetainedResult
public class DiffExprGeneSearchResult extends Object implements Serializable
Value object for differential expression result for one result - corresponds to the DifferentialExpressionAnalysisResults for one gene in one ResultSet (combined for multiple probes), but represents only the "selected" analysisResult. It can represent a 'dummy' (missing value) if the resultSetId and the geneId are populated.
Author:
anton, paul
See Also:

  • Constructor Details

    • DiffExprGeneSearchResult

      public DiffExprGeneSearchResult(Long resultSetId, Long geneId)

  • Method Details

    • getCorrectedPvalue

      public Double getCorrectedPvalue()

    • setCorrectedPvalue

      public void setCorrectedPvalue(Double correctedPvalue)
      Parameters:
      correctedPvalue - the corrected pvalue (i.e., a q-value)

    • getGeneId

      public long getGeneId()

    • setGeneId

      public void setGeneId(Long geneId)

    • getNumberOfProbes

      public int getNumberOfProbes()

    • setNumberOfProbes

      public void setNumberOfProbes(int numberOfProbes)

    • getNumberOfProbesDiffExpressed

      public int getNumberOfProbesDiffExpressed()

    • setNumberOfProbesDiffExpressed

      public void setNumberOfProbesDiffExpressed(int numberOfProbesDiffExpressed)

    • getPvalue

      public Double getPvalue()

    • setPvalue

      public void setPvalue(Double pvalue)
      Parameters:
      pvalue - the uncorrected pvalue.

    • getResultId

      public Long getResultId()
      Returns:
      the id of the underlying DifferentialExpressionAnalysisResult. This will be null if there is no result for the resultSet and geneId.

    • setResultId

      public void setResultId(long resultId)
      Not to be confused with resultSetId.
      Parameters:
      resultId - the ID of the specific result stored.

    • getResultSetId

      public Long getResultSetId()

    • setResultSetId

      public void setResultSetId(Long resultSetId)

    • getScore

      public Double getScore()

    • setScore

      public void setScore(Double score)

    • hashCode

      public int hashCode()
      Overrides:
      hashCode in class Object

    • equals

      public boolean equals(Object obj)
      Overrides:
      equals in class Object

    • toString

      public String toString()
      Overrides:
      toString in class Object