Uses of Class
ubic.gemma.model.association.Gene2GOAssociation

Packages that use Gene2GOAssociation

Package	Description
ubic.gemma.core.loader.association
ubic.gemma.model.association
ubic.gemma.persistence.service.association
ubic.gemma.persistence.util

Uses of Gene2GOAssociation in ubic.gemma.core.loader.association

Methods in ubic.gemma.core.loader.association that return Gene2GOAssociation

Modifier and Type	Method	Description
Gene2GOAssociation	NCBIGene2GOAssociationParser.mapFromGene2GO(String line)	Note that "-" means a missing value, which in practice only occurs in the "qualifier" and "pubmed" columns.
Gene2GOAssociation	NCBIGene2GOAssociationParser.parseOneLine(String line)

Methods in ubic.gemma.core.loader.association that return types with arguments of type Gene2GOAssociation

Modifier and Type	Method	Description
Collection<Gene2GOAssociation>	NCBIGene2GOAssociationParser.getResults()

Methods in ubic.gemma.core.loader.association with parameters of type Gene2GOAssociation

Modifier and Type	Method	Description
protected void	NCBIGene2GOAssociationParser.addResult(Gene2GOAssociation obj)

Method parameters in ubic.gemma.core.loader.association with type arguments of type Gene2GOAssociation

Modifier and Type	Method	Description
void	NCBIGene2GOAssociationParser.parse(InputStream inputStream, BlockingQueue<Gene2GOAssociation> aqueue)

Uses of Gene2GOAssociation in ubic.gemma.model.association

Methods in ubic.gemma.model.association that return Gene2GOAssociation

Modifier and Type	Method	Description
static Gene2GOAssociation	Gene2GOAssociation.Factory.newInstance(Gene gene, Characteristic ontologyEntry, GOEvidenceCode evidenceCode)

Uses of Gene2GOAssociation in ubic.gemma.persistence.service.association

Methods in ubic.gemma.persistence.service.association that return Gene2GOAssociation

Modifier and Type	Method	Description
Gene2GOAssociation	Gene2GOAssociationService.create(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationDao.find(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationDaoImpl.find(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationDao.findOrCreate(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationService.findOrCreate(Gene2GOAssociation gene2GOAssociation)

Methods in ubic.gemma.persistence.service.association that return types with arguments of type Gene2GOAssociation

Modifier and Type	Method	Description
Collection<Gene2GOAssociation>	Gene2GOAssociationDao.findAssociationByGene(Gene gene)
Collection<Gene2GOAssociation>	Gene2GOAssociationDaoImpl.findAssociationByGene(Gene gene)
Collection<Gene2GOAssociation>	Gene2GOAssociationService.findAssociationByGene(Gene gene)
Collection<Gene2GOAssociation>	Gene2GOAssociationServiceImpl.findAssociationByGene(Gene gene)
Collection<Gene2GOAssociation>	Gene2GOAssociationDao.findAssociationByGenes(Collection<Gene> genes)
Collection<Gene2GOAssociation>	Gene2GOAssociationDaoImpl.findAssociationByGenes(Collection<Gene> genes)
Collection<Gene2GOAssociation>	Gene2GOAssociationService.findAssociationByGenes(Collection<Gene> genes)
Collection<Gene2GOAssociation>	Gene2GOAssociationServiceImpl.findAssociationByGenes(Collection<Gene> genes)

Methods in ubic.gemma.persistence.service.association with parameters of type Gene2GOAssociation

Modifier and Type	Method	Description
Gene2GOAssociation	Gene2GOAssociationService.create(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationDao.find(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationDaoImpl.find(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationDao.findOrCreate(Gene2GOAssociation gene2GOAssociation)
Gene2GOAssociation	Gene2GOAssociationService.findOrCreate(Gene2GOAssociation gene2GOAssociation)

Uses of Gene2GOAssociation in ubic.gemma.persistence.util

Methods in ubic.gemma.persistence.util with parameters of type Gene2GOAssociation

Modifier and Type	Method	Description
static void	BusinessKey.addRestrictions(Criteria queryObject, Gene2GOAssociation gene2GOAssociation)
static void	BusinessKey.checkValidKey(Gene2GOAssociation gene2GOAssociation)