Package ubic.gemma.model.common.description

Class BibliographicReference

java.lang.Object
ubic.gemma.model.common.AbstractIdentifiable
ubic.gemma.model.common.AbstractDescribable
ubic.gemma.model.common.description.BibliographicReference
All Implemented Interfaces:
Describable, Identifiable
@Indexed public class BibliographicReference extends AbstractDescribable

  • Constructor Details

    • BibliographicReference

      public BibliographicReference()

  • Method Details

    • getId

      @DocumentId public Long getId()
      Specified by:
      getId in interface Identifiable
      Overrides:
      getId in class AbstractIdentifiable

    • equals

      public boolean equals(Object object)
      Description copied from class: AbstractIdentifiable
      Important note: Two objects with the same class and non-null ID must be considered equal. If one or both IDs are nulls, the rest of the state can be used to determine equality.
      Specified by:
      equals in class AbstractIdentifiable

    • getName

      @Field public String getName()
      Description copied from interface: Describable
      Obtain the name of an object is a possibly ambiguous human-readable identifier that need not be an external database reference.
      Specified by:
      getName in interface Describable
      Overrides:
      getName in class AbstractDescribable

    • getAbstractText

      @Field(store=YES) public String getAbstractText()

    • setAbstractText

      public void setAbstractText(String abstractText)

    • getAnnotatedAbstract

      @Deprecated public String getAnnotatedAbstract()
      Deprecated.
      Returns:
      A version of the abstract with inserted markup (e.g., abbreviation expansions, part-of-speech)

    • setAnnotatedAbstract

      @Deprecated public void setAnnotatedAbstract(String annotatedAbstract)
      Deprecated.

    • getAnnotations

      @Deprecated public Set<Characteristic> getAnnotations()
      Deprecated.

    • setAnnotations

      @Deprecated public void setAnnotations(Set<Characteristic> annotations)
      Deprecated.

    • getAuthorList

      @Field(store=YES) public String getAuthorList()

    • setAuthorList

      public void setAuthorList(String authorList)

    • getChemicals

      @IndexedEmbedded public Set<Compound> getChemicals()

    • setChemicals

      public void setChemicals(Set<Compound> chemicals)

    • getCitation

      public String getCitation()
      Returns:
      The citation as a pre-composed string

    • setCitation

      public void setCitation(String citation)

    • getEditor

      public String getEditor()

    • setEditor

      public void setEditor(String editor)

    • getFullTextUri

      @Field(analyze=NO) public String getFullTextUri()
      Returns:
      URI of the full text on the publisher's web site.

    • setFullTextUri

      public void setFullTextUri(String fullTextUri)

    • getIssue

      public String getIssue()

    • setIssue

      public void setIssue(String issue)

    • getKeywords

      @IndexedEmbedded public Set<Keyword> getKeywords()

    • setKeywords

      public void setKeywords(Set<Keyword> keywords)

    • getMeshTerms

      @IndexedEmbedded public Set<MedicalSubjectHeading> getMeshTerms()

    • setMeshTerms

      public void setMeshTerms(Set<MedicalSubjectHeading> meshTerms)

    • getPages

      public String getPages()

    • setPages

      public void setPages(String pages)

    • getPubAccession

      @IndexedEmbedded public DatabaseEntry getPubAccession()

    • setPubAccession

      public void setPubAccession(DatabaseEntry pubAccession)

    • getPublication

      public String getPublication()

    • setPublication

      public void setPublication(String publication)

    • getPublicationDate

      public Date getPublicationDate()

    • setPublicationDate

      public void setPublicationDate(Date publicationDate)

    • getPublisher

      public String getPublisher()

    • setPublisher

      public void setPublisher(String publisher)

    • getTitle

      @Field(store=YES) public String getTitle()

    • setTitle

      public void setTitle(String title)

    • getVolume

      public String getVolume()

    • setVolume

      public void setVolume(String volume)

    • getRetracted

      public Boolean getRetracted()
      Returns:
      true if article is recorded as retracted

    • setRetracted

      public void setRetracted(Boolean retracted)
      Parameters:
      retracted - the retracted to set