Class ArrayDesignReferenceValueObject

java.lang.Object

ubic.gemma.model.expression.arrayDesign.ArrayDesignReferenceValueObject

All Implemented Interfaces:

Serializable

public class ArrayDesignReferenceValueObject
extends Object
implements Serializable

Compact platform identity — enough to name a platform and link to it.

Exists so ArrayDesignValueObject can point at another platform (its merge target, or the platforms merged into it) without nesting a full platform VO, which would recurse and carry curation details, taxon, external references and event triples that a cross-reference never renders.

Author:

paul

See Also:

• Serialized Form

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	ArrayDesignReferenceValueObject.FromArrayDesignValueObject	Project a full ArrayDesignValueObject down to this shape at serialization time.

Constructor Summary

Constructors

Constructor	Description
ArrayDesignReferenceValueObject()
ArrayDesignReferenceValueObject(Long id, String shortName)	The identity-only form, for the callers that select two columns.
ArrayDesignReferenceValueObject(Long id, String shortName, String name)	Identity plus name, for the callers that have no technology type in hand.
ArrayDesignReferenceValueObject(Long id, String shortName, String name, String technologyType)	Creates a new ArrayDesignReferenceValueObject instance.

Method Summary

Modifier and Type	Method	Description
protected boolean	canEqual(Object other)
boolean	equals(Object o)
Long	getId()	Gemma-internal platform id, suitable for GET /platforms/{id}.
String	getName()	Full name, e.g.
String	getShortName()	Short name, e.g.
String	getTechnologyType()	What kind of platform it is — ONECOLOR, TWOCOLOR, SEQUENCING, GENELIST, OTHER.
int	hashCode()
void	setId(Long id)	Gemma-internal platform id, suitable for GET /platforms/{id}.
void	setName(String name)	Full name, e.g.
void	setShortName(String shortName)	Short name, e.g.
void	setTechnologyType(String technologyType)	What kind of platform it is — ONECOLOR, TWOCOLOR, SEQUENCING, GENELIST, OTHER.
String	toString()

Methods inherited from class Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

ArrayDesignReferenceValueObject

public ArrayDesignReferenceValueObject(Long id,
 @Nullable
 String shortName)

The identity-only form, for the callers that select two columns.

ArrayDesignReferenceValueObject

public ArrayDesignReferenceValueObject(Long id,
 @Nullable
 String shortName,
 @Nullable
 String name)

Identity plus name, for the callers that have no technology type in hand.

ArrayDesignReferenceValueObject

public ArrayDesignReferenceValueObject()

ArrayDesignReferenceValueObject

public ArrayDesignReferenceValueObject(Long id,
 @Nullable
 String shortName,
 @Nullable
 String name,
 @Nullable
 String technologyType)

Creates a new ArrayDesignReferenceValueObject instance.

Parameters:

id - Gemma-internal platform id, suitable for GET /platforms/{id}.

shortName - Short name, e.g. GPL96. This is what a page displays.

name - Full name, e.g. Affymetrix GeneChip Human Genome U133A 2.0 Array.

The short name is an accession and the full name is the only part a curator reads as a description of the hardware, so a reference that carries only the accession cannot in fact name the platform it points at.

technologyType - What kind of platform it is — ONECOLOR, TWOCOLOR, SEQUENCING, GENELIST, OTHER. Rendered as the enum's name.

Here because a client that has to say whether a dataset is a microarray or a sequencing run was otherwise reduced to matching the platform's NAME against a pattern — which reads correctly for Affymetrix GeneChip … by luck and returns nothing for a sequencing platform that does not say so in its name (uib, 2026-08-28).

Method Details

toString

public String toString()

Overrides:

toString in class Object

getId

public Long getId()

Gemma-internal platform id, suitable for GET /platforms/{id}.

getShortName

@Nullable
public String getShortName()

Short name, e.g. GPL96. This is what a page displays.

getName

@Nullable
public String getName()

Full name, e.g. Affymetrix GeneChip Human Genome U133A 2.0 Array.

The short name is an accession and the full name is the only part a curator reads as a description of the hardware, so a reference that carries only the accession cannot in fact name the platform it points at.

getTechnologyType

@Nullable
public String getTechnologyType()

What kind of platform it is — ONECOLOR, TWOCOLOR, SEQUENCING, GENELIST, OTHER. Rendered as the enum's name.

Here because a client that has to say whether a dataset is a microarray or a sequencing run was otherwise reduced to matching the platform's NAME against a pattern — which reads correctly for Affymetrix GeneChip … by luck and returns nothing for a sequencing platform that does not say so in its name (uib, 2026-08-28).

setId

public void setId(Long id)

Gemma-internal platform id, suitable for GET /platforms/{id}.

setShortName

public void setShortName(@Nullable
 String shortName)

Short name, e.g. GPL96. This is what a page displays.

setName

public void setName(@Nullable
 String name)

Full name, e.g. Affymetrix GeneChip Human Genome U133A 2.0 Array.

The short name is an accession and the full name is the only part a curator reads as a description of the hardware, so a reference that carries only the accession cannot in fact name the platform it points at.

setTechnologyType

public void setTechnologyType(@Nullable
 String technologyType)

What kind of platform it is — ONECOLOR, TWOCOLOR, SEQUENCING, GENELIST, OTHER. Rendered as the enum's name.

Here because a client that has to say whether a dataset is a microarray or a sequencing run was otherwise reduced to matching the platform's NAME against a pattern — which reads correctly for Affymetrix GeneChip … by luck and returns nothing for a sequencing platform that does not say so in its name (uib, 2026-08-28).

equals

public boolean equals(Object o)

Overrides:

equals in class Object

canEqual

protected boolean canEqual(Object other)

hashCode

public int hashCode()

Overrides:

hashCode in class Object