Package ubic.gemma.model.expression.arrayDesign

Enum TechnologyType

java.lang.Object
java.lang.Enum<TechnologyType>
ubic.gemma.model.expression.arrayDesign.TechnologyType
All Implemented Interfaces:
Serializable, Comparable<TechnologyType>
public enum TechnologyType extends Enum<TechnologyType>

  • Enum Constant Details

    • TWOCOLOR

      public static final TechnologyType TWOCOLOR
      Indicates this platform uses two channels and expression measurements are ratios.

    • DUALMODE

      public static final TechnologyType DUALMODE
      Indicates this platform can be used in either a one- or two- channel mode.

    • ONECOLOR

      public static final TechnologyType ONECOLOR
      Indicates this platform uses one channel and measurements are non-ratiometric (e.g. Affymetrix oligo arrays)

    • SEQUENCING

      public static final TechnologyType SEQUENCING
      Indicate the platform is based on sequencing (e.g. Illumina short reads, SAGE, OxfordNanopore). However, once we process RNA-seq data it ends up on a GENELIST platform.

    • GENELIST

      public static final TechnologyType GENELIST
      Indicates that this "platform" is just a list of genes (we use this for RNA-seq)

    • OTHER

      public static final TechnologyType OTHER
      We don't know

  • Field Details

    • MICROARRAY

      public static final EnumSet<TechnologyType> MICROARRAY
      Enumeration of microarray platforms.

  • Method Details

    • values

      public static TechnologyType[] values()
      Returns an array containing the constants of this enum type, in the order they are declared.
      Returns:
      an array containing the constants of this enum type, in the order they are declared

    • valueOf

      public static TechnologyType valueOf(String name)
      Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
      Parameters:
      name - the name of the enum constant to be returned.
      Returns:
      the enum constant with the specified name
      Throws:
      IllegalArgumentException - if this enum type has no constant with the specified name
      NullPointerException - if the argument is null